Gene : Cagra.0535s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11028 - VACUOLAR ATP SYNTHASE SUBUNIT AC39 Genomic Order:  2
Name:  ? Cagra.0535s0002 Secondary Identifier:  ? PAC:28913813
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0535s0002 0.5kb upstream 0.5kb upstream 2584 true Scaffold535: 11008-13591 Capsella grandiflora
Cagra.0535s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold535: 13092-13591 Capsella grandiflora
Cagra.0535s0002 0.5kb downstream 0.5kb downstream 2584 true Scaffold535: 10508-13091 Capsella grandiflora
Cagra.0535s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold535: 10508-11007 Capsella grandiflora
Cagra.0535s0002 1.0kb upstream 1.0kb upstream 3084 true Scaffold535: 11008-14091 Capsella grandiflora
Cagra.0535s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold535: 13092-14091 Capsella grandiflora
Cagra.0535s0002 1.0kb downstream 1.0kb downstream 3084 true Scaffold535: 10008-13091 Capsella grandiflora
Cagra.0535s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold535: 10008-11007 Capsella grandiflora
Cagra.0535s0002 2.0kb upstream 2.0kb upstream 4084 true Scaffold535: 11008-15091 Capsella grandiflora
Cagra.0535s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold535: 13092-15091 Capsella grandiflora
Cagra.0535s0002 2.0kb downstream 2.0kb downstream 4084 true Scaffold535: 9008-13091 Capsella grandiflora
Cagra.0535s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold535: 9008-11007 Capsella grandiflora
Cagra.0535s0002 5.0kb upstream 5.0kb upstream 7084 true Scaffold535: 11008-18091 Capsella grandiflora
Cagra.0535s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold535: 13092-18091 Capsella grandiflora
Cagra.0535s0002 5.0kb downstream 5.0kb downstream 7084 true Scaffold535: 6008-13091 Capsella grandiflora
Cagra.0535s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold535: 6008-11007 Capsella grandiflora
Cagra.0535s0002 10.0kb upstream 10.0kb upstream 12084 true Scaffold535: 11008-23091 Capsella grandiflora
Cagra.0535s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold535: 13092-23091 Capsella grandiflora
Cagra.0535s0002 10.0kb downstream 10.0kb downstream 12084 true Scaffold535: 1008-13091 Capsella grandiflora
Cagra.0535s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold535: 1008-11007 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370139 5261 Brassicaceae View MSA
123836842 5264 Brassicales-Malvales View MSA
124345235 5266 SBM View MSA
124242151 5268 Malvidae View MSA
124065072 5270 Rosid View MSA
123742149 5271 Pentapetalae View MSA
122786040 5272 Eudicot View MSA
122045239 5273 Angiosperm View MSA
121345158 5274 Embryophyte View MSA
123427776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain