Gene : Cagra.0535s0008 C. grandiflora v1.1
Defline:  (1 of 1) 1.4.1.24 - 3-dehydroquinate synthase II / DHQ synthase II Genomic Order:  8
Name:  ? Cagra.0535s0008 Secondary Identifier:  ? PAC:28913810
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0535s0008 0.5kb upstream 0.5kb upstream 3037 true Scaffold535: 34294-37330 Capsella grandiflora
Cagra.0535s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold535: 36831-37330 Capsella grandiflora
Cagra.0535s0008 0.5kb downstream 0.5kb downstream 3037 true Scaffold535: 33794-36830 Capsella grandiflora
Cagra.0535s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold535: 33794-34293 Capsella grandiflora
Cagra.0535s0008 1.0kb upstream 1.0kb upstream 3537 true Scaffold535: 34294-37830 Capsella grandiflora
Cagra.0535s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold535: 36831-37830 Capsella grandiflora
Cagra.0535s0008 1.0kb downstream 1.0kb downstream 3537 true Scaffold535: 33294-36830 Capsella grandiflora
Cagra.0535s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold535: 33294-34293 Capsella grandiflora
Cagra.0535s0008 2.0kb upstream 2.0kb upstream 4537 true Scaffold535: 34294-38830 Capsella grandiflora
Cagra.0535s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold535: 36831-38830 Capsella grandiflora
Cagra.0535s0008 2.0kb downstream 2.0kb downstream 4537 true Scaffold535: 32294-36830 Capsella grandiflora
Cagra.0535s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold535: 32294-34293 Capsella grandiflora
Cagra.0535s0008 5.0kb upstream 5.0kb upstream 7537 true Scaffold535: 34294-41830 Capsella grandiflora
Cagra.0535s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold535: 36831-41830 Capsella grandiflora
Cagra.0535s0008 5.0kb downstream 5.0kb downstream 7537 true Scaffold535: 29294-36830 Capsella grandiflora
Cagra.0535s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold535: 29294-34293 Capsella grandiflora
Cagra.0535s0008 10.0kb upstream 10.0kb upstream 12537 true Scaffold535: 34294-46830 Capsella grandiflora
Cagra.0535s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold535: 36831-46830 Capsella grandiflora
Cagra.0535s0008 10.0kb downstream 10.0kb downstream 12537 true Scaffold535: 24294-36830 Capsella grandiflora
Cagra.0535s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold535: 24294-34293 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377428 5261 Brassicaceae View MSA
123828260 5264 Brassicales-Malvales View MSA
124321521 5266 SBM View MSA
124244504 5268 Malvidae View MSA
124061503 5270 Rosid View MSA
123737168 5271 Pentapetalae View MSA
122788177 5272 Eudicot View MSA
122045215 5273 Angiosperm View MSA
121347286 5274 Embryophyte View MSA
123427412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain