Gene : Cagra.0537s0011 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31413:SF4 - NINJA-FAMILY PROTEIN AFP1-RELATED Genomic Order:  11
Name:  ? Cagra.0537s0011 Secondary Identifier:  ? PAC:28911708
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0537s0011 0.5kb upstream 0.5kb upstream 2187 true Scaffold537: 48220-50406 Capsella grandiflora
Cagra.0537s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold537: 48220-48719 Capsella grandiflora
Cagra.0537s0011 0.5kb downstream 0.5kb downstream 2187 true Scaffold537: 48720-50906 Capsella grandiflora
Cagra.0537s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold537: 50407-50906 Capsella grandiflora
Cagra.0537s0011 1.0kb upstream 1.0kb upstream 2687 true Scaffold537: 47720-50406 Capsella grandiflora
Cagra.0537s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold537: 47720-48719 Capsella grandiflora
Cagra.0537s0011 1.0kb downstream 1.0kb downstream 2687 true Scaffold537: 48720-51406 Capsella grandiflora
Cagra.0537s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold537: 50407-51406 Capsella grandiflora
Cagra.0537s0011 2.0kb upstream 2.0kb upstream 3687 true Scaffold537: 46720-50406 Capsella grandiflora
Cagra.0537s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold537: 46720-48719 Capsella grandiflora
Cagra.0537s0011 2.0kb downstream 2.0kb downstream 3687 true Scaffold537: 48720-52406 Capsella grandiflora
Cagra.0537s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold537: 50407-52406 Capsella grandiflora
Cagra.0537s0011 5.0kb upstream 5.0kb upstream 6687 true Scaffold537: 43720-50406 Capsella grandiflora
Cagra.0537s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold537: 43720-48719 Capsella grandiflora
Cagra.0537s0011 5.0kb downstream 5.0kb downstream 6687 true Scaffold537: 48720-55406 Capsella grandiflora
Cagra.0537s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold537: 50407-55406 Capsella grandiflora
Cagra.0537s0011 10.0kb upstream 10.0kb upstream 11687 true Scaffold537: 38720-50406 Capsella grandiflora
Cagra.0537s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold537: 38720-48719 Capsella grandiflora
Cagra.0537s0011 10.0kb downstream 10.0kb downstream 11687 true Scaffold537: 48720-60406 Capsella grandiflora
Cagra.0537s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold537: 50407-60406 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373623 5261 Brassicaceae View MSA
123841111 5264 Brassicales-Malvales View MSA
124349458 5266 SBM View MSA
124251961 5268 Malvidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain