Gene : Cagra.0537s0027 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11673 - TRANSLATION INITIATION FACTOR 5A-RELATED Genomic Order:  27
Name:  ? Cagra.0537s0027 Secondary Identifier:  ? PAC:28911720
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0537s0027 0.5kb upstream 0.5kb upstream 1654 true Scaffold537: 101981-103634 Capsella grandiflora
Cagra.0537s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold537: 101981-102480 Capsella grandiflora
Cagra.0537s0027 0.5kb downstream 0.5kb downstream 1654 true Scaffold537: 102481-104134 Capsella grandiflora
Cagra.0537s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold537: 103635-104134 Capsella grandiflora
Cagra.0537s0027 1.0kb upstream 1.0kb upstream 2154 true Scaffold537: 101481-103634 Capsella grandiflora
Cagra.0537s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold537: 101481-102480 Capsella grandiflora
Cagra.0537s0027 1.0kb downstream 1.0kb downstream 2154 true Scaffold537: 102481-104634 Capsella grandiflora
Cagra.0537s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold537: 103635-104634 Capsella grandiflora
Cagra.0537s0027 2.0kb upstream 2.0kb upstream 3154 true Scaffold537: 100481-103634 Capsella grandiflora
Cagra.0537s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold537: 100481-102480 Capsella grandiflora
Cagra.0537s0027 2.0kb downstream 2.0kb downstream 3154 true Scaffold537: 102481-105634 Capsella grandiflora
Cagra.0537s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold537: 103635-105634 Capsella grandiflora
Cagra.0537s0027 5.0kb upstream 5.0kb upstream 6154 true Scaffold537: 97481-103634 Capsella grandiflora
Cagra.0537s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold537: 97481-102480 Capsella grandiflora
Cagra.0537s0027 5.0kb downstream 5.0kb downstream 6154 true Scaffold537: 102481-108634 Capsella grandiflora
Cagra.0537s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold537: 103635-108634 Capsella grandiflora
Cagra.0537s0027 10.0kb upstream 10.0kb upstream 11154 true Scaffold537: 92481-103634 Capsella grandiflora
Cagra.0537s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold537: 92481-102480 Capsella grandiflora
Cagra.0537s0027 10.0kb downstream 10.0kb downstream 11154 true Scaffold537: 102481-113634 Capsella grandiflora
Cagra.0537s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold537: 103635-113634 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367595 5261 Brassicaceae View MSA
123837860 5264 Brassicales-Malvales View MSA
124351579 5266 SBM View MSA
124244087 5268 Malvidae View MSA
124072640 5270 Rosid View MSA
123750235 5271 Pentapetalae View MSA
122796875 5272 Eudicot View MSA
122047476 5273 Angiosperm View MSA
121345847 5274 Embryophyte View MSA
123426583 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain