Gene : Cagra.0538s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31808:SF2 - F21O3.2 PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.0538s0001 Secondary Identifier:  ? PAC:28917723
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0538s0001 0.5kb upstream 0.5kb upstream 2437 true Scaffold538: 2040-4476 Capsella grandiflora
Cagra.0538s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold538: 3977-4476 Capsella grandiflora
Cagra.0538s0001 0.5kb downstream 0.5kb downstream 2437 true Scaffold538: 1540-3976 Capsella grandiflora
Cagra.0538s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold538: 1540-2039 Capsella grandiflora
Cagra.0538s0001 1.0kb upstream 1.0kb upstream 2937 true Scaffold538: 2040-4976 Capsella grandiflora
Cagra.0538s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold538: 3977-4976 Capsella grandiflora
Cagra.0538s0001 1.0kb downstream 1.0kb downstream 2937 true Scaffold538: 1040-3976 Capsella grandiflora
Cagra.0538s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold538: 1040-2039 Capsella grandiflora
Cagra.0538s0001 2.0kb upstream 2.0kb upstream 3937 true Scaffold538: 2040-5976 Capsella grandiflora
Cagra.0538s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold538: 3977-5976 Capsella grandiflora
Cagra.0538s0001 2.0kb downstream 2.0kb downstream 3937 true Scaffold538: 40-3976 Capsella grandiflora
Cagra.0538s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold538: 40-2039 Capsella grandiflora
Cagra.0538s0001 5.0kb upstream 5.0kb upstream 5516 true Scaffold538: 2040-7555 Capsella grandiflora
Cagra.0538s0001 5.0kb upstream 5.0kb upstream 3579 false Scaffold538: 3977-7555 Capsella grandiflora
Cagra.0538s0001 5.0kb downstream 5.0kb downstream 3976 true Scaffold538: 1-3976 Capsella grandiflora
Cagra.0538s0001 5.0kb downstream 5.0kb downstream 2039 false Scaffold538: 1-2039 Capsella grandiflora
Cagra.0538s0001 10.0kb upstream 10.0kb upstream 5516 true Scaffold538: 2040-7555 Capsella grandiflora
Cagra.0538s0001 10.0kb upstream 10.0kb upstream 3579 false Scaffold538: 3977-7555 Capsella grandiflora
Cagra.0538s0001 10.0kb downstream 10.0kb downstream 3976 true Scaffold538: 1-3976 Capsella grandiflora
Cagra.0538s0001 10.0kb downstream 10.0kb downstream 2039 false Scaffold538: 1-2039 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361461 5261 Brassicaceae View MSA
123798178 5264 Brassicales-Malvales View MSA
124295850 5266 SBM View MSA
124250371 5268 Malvidae View MSA
124063966 5270 Rosid View MSA
123742613 5271 Pentapetalae View MSA
122790300 5272 Eudicot View MSA
122047287 5273 Angiosperm View MSA
121310722 5274 Embryophyte View MSA
123428654 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain