Gene : Cagra.0495s0058 C. grandiflora v1.1
Defline:  (1 of 4) PTHR13697:SF7 - 6-PHOSPHOFRUCTOKINASE 1-RELATED Genomic Order:  58
Name:  ? Cagra.0495s0058 Secondary Identifier:  ? PAC:28897138
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ANAEROFRUCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora ANAGLYCOLYSIS-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-1042 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0495s0058 0.5kb upstream 0.5kb upstream 3955 true Scaffold495: 186300-190254 Capsella grandiflora
Cagra.0495s0058 0.5kb upstream 0.5kb upstream 500 false Scaffold495: 186300-186799 Capsella grandiflora
Cagra.0495s0058 0.5kb downstream 0.5kb downstream 3955 true Scaffold495: 186800-190754 Capsella grandiflora
Cagra.0495s0058 0.5kb downstream 0.5kb downstream 500 false Scaffold495: 190255-190754 Capsella grandiflora
Cagra.0495s0058 1.0kb upstream 1.0kb upstream 4455 true Scaffold495: 185800-190254 Capsella grandiflora
Cagra.0495s0058 1.0kb upstream 1.0kb upstream 1000 false Scaffold495: 185800-186799 Capsella grandiflora
Cagra.0495s0058 1.0kb downstream 1.0kb downstream 4455 true Scaffold495: 186800-191254 Capsella grandiflora
Cagra.0495s0058 1.0kb downstream 1.0kb downstream 1000 false Scaffold495: 190255-191254 Capsella grandiflora
Cagra.0495s0058 2.0kb upstream 2.0kb upstream 5455 true Scaffold495: 184800-190254 Capsella grandiflora
Cagra.0495s0058 2.0kb upstream 2.0kb upstream 2000 false Scaffold495: 184800-186799 Capsella grandiflora
Cagra.0495s0058 2.0kb downstream 2.0kb downstream 5455 true Scaffold495: 186800-192254 Capsella grandiflora
Cagra.0495s0058 2.0kb downstream 2.0kb downstream 2000 false Scaffold495: 190255-192254 Capsella grandiflora
Cagra.0495s0058 5.0kb upstream 5.0kb upstream 8455 true Scaffold495: 181800-190254 Capsella grandiflora
Cagra.0495s0058 5.0kb upstream 5.0kb upstream 5000 false Scaffold495: 181800-186799 Capsella grandiflora
Cagra.0495s0058 5.0kb downstream 5.0kb downstream 8455 true Scaffold495: 186800-195254 Capsella grandiflora
Cagra.0495s0058 5.0kb downstream 5.0kb downstream 5000 false Scaffold495: 190255-195254 Capsella grandiflora
Cagra.0495s0058 10.0kb upstream 10.0kb upstream 13455 true Scaffold495: 176800-190254 Capsella grandiflora
Cagra.0495s0058 10.0kb upstream 10.0kb upstream 10000 false Scaffold495: 176800-186799 Capsella grandiflora
Cagra.0495s0058 10.0kb downstream 10.0kb downstream 13455 true Scaffold495: 186800-200254 Capsella grandiflora
Cagra.0495s0058 10.0kb downstream 10.0kb downstream 10000 false Scaffold495: 190255-200254 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
122363993 5261 Brassicaceae View MSA
123798663 5264 Brassicales-Malvales View MSA
124296271 5266 SBM View MSA
124148474 5268 Malvidae View MSA
124069245 5270 Rosid View MSA
123747020 5271 Pentapetalae View MSA
122788773 5272 Eudicot View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain