Gene : Cagra.0495s0048 C. grandiflora v1.1
Defline:  (1 of 5) PTHR33830:SF1 - DEFENSIN-LIKE PROTEIN 155-RELATED Genomic Order:  48
Name:  ? Cagra.0495s0048 Secondary Identifier:  ? PAC:28897119
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0495s0048 0.5kb upstream 0.5kb upstream 853 true Scaffold495: 155413-156265 Capsella grandiflora
Cagra.0495s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold495: 155413-155912 Capsella grandiflora
Cagra.0495s0048 0.5kb downstream 0.5kb downstream 853 true Scaffold495: 155913-156765 Capsella grandiflora
Cagra.0495s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold495: 156266-156765 Capsella grandiflora
Cagra.0495s0048 1.0kb upstream 1.0kb upstream 1353 true Scaffold495: 154913-156265 Capsella grandiflora
Cagra.0495s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold495: 154913-155912 Capsella grandiflora
Cagra.0495s0048 1.0kb downstream 1.0kb downstream 1353 true Scaffold495: 155913-157265 Capsella grandiflora
Cagra.0495s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold495: 156266-157265 Capsella grandiflora
Cagra.0495s0048 2.0kb upstream 2.0kb upstream 2353 true Scaffold495: 153913-156265 Capsella grandiflora
Cagra.0495s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold495: 153913-155912 Capsella grandiflora
Cagra.0495s0048 2.0kb downstream 2.0kb downstream 2353 true Scaffold495: 155913-158265 Capsella grandiflora
Cagra.0495s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold495: 156266-158265 Capsella grandiflora
Cagra.0495s0048 5.0kb upstream 5.0kb upstream 5353 true Scaffold495: 150913-156265 Capsella grandiflora
Cagra.0495s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold495: 150913-155912 Capsella grandiflora
Cagra.0495s0048 5.0kb downstream 5.0kb downstream 5353 true Scaffold495: 155913-161265 Capsella grandiflora
Cagra.0495s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold495: 156266-161265 Capsella grandiflora
Cagra.0495s0048 10.0kb upstream 10.0kb upstream 10353 true Scaffold495: 145913-156265 Capsella grandiflora
Cagra.0495s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold495: 145913-155912 Capsella grandiflora
Cagra.0495s0048 10.0kb downstream 10.0kb downstream 10353 true Scaffold495: 155913-166265 Capsella grandiflora
Cagra.0495s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold495: 156266-166265 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792133 5273 Angiosperm View MSA
122378813 5261 Brassicaceae View MSA
123802000 5264 Brassicales-Malvales View MSA
124299231 5266 SBM View MSA
124251397 5268 Malvidae View MSA
124067401 5270 Rosid View MSA
123743891 5271 Pentapetalae View MSA
122796538 5272 Eudicot View MSA
121063384 5274 Embryophyte View MSA
123103137 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain