Gene : Cagra.0495s0063 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22761:SF8 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED Genomic Order:  63
Name:  ? Cagra.0495s0063 Secondary Identifier:  ? PAC:28897118
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0495s0063 0.5kb upstream 0.5kb upstream 2389 true Scaffold495: 209920-212308 Capsella grandiflora
Cagra.0495s0063 0.5kb upstream 0.5kb upstream 500 false Scaffold495: 211809-212308 Capsella grandiflora
Cagra.0495s0063 0.5kb downstream 0.5kb downstream 2389 true Scaffold495: 209420-211808 Capsella grandiflora
Cagra.0495s0063 0.5kb downstream 0.5kb downstream 500 false Scaffold495: 209420-209919 Capsella grandiflora
Cagra.0495s0063 1.0kb upstream 1.0kb upstream 2889 true Scaffold495: 209920-212808 Capsella grandiflora
Cagra.0495s0063 1.0kb upstream 1.0kb upstream 1000 false Scaffold495: 211809-212808 Capsella grandiflora
Cagra.0495s0063 1.0kb downstream 1.0kb downstream 2889 true Scaffold495: 208920-211808 Capsella grandiflora
Cagra.0495s0063 1.0kb downstream 1.0kb downstream 1000 false Scaffold495: 208920-209919 Capsella grandiflora
Cagra.0495s0063 2.0kb upstream 2.0kb upstream 3889 true Scaffold495: 209920-213808 Capsella grandiflora
Cagra.0495s0063 2.0kb upstream 2.0kb upstream 2000 false Scaffold495: 211809-213808 Capsella grandiflora
Cagra.0495s0063 2.0kb downstream 2.0kb downstream 3889 true Scaffold495: 207920-211808 Capsella grandiflora
Cagra.0495s0063 2.0kb downstream 2.0kb downstream 2000 false Scaffold495: 207920-209919 Capsella grandiflora
Cagra.0495s0063 5.0kb upstream 5.0kb upstream 6889 true Scaffold495: 209920-216808 Capsella grandiflora
Cagra.0495s0063 5.0kb upstream 5.0kb upstream 5000 false Scaffold495: 211809-216808 Capsella grandiflora
Cagra.0495s0063 5.0kb downstream 5.0kb downstream 6889 true Scaffold495: 204920-211808 Capsella grandiflora
Cagra.0495s0063 5.0kb downstream 5.0kb downstream 5000 false Scaffold495: 204920-209919 Capsella grandiflora
Cagra.0495s0063 10.0kb upstream 10.0kb upstream 11889 true Scaffold495: 209920-221808 Capsella grandiflora
Cagra.0495s0063 10.0kb upstream 10.0kb upstream 10000 false Scaffold495: 211809-221808 Capsella grandiflora
Cagra.0495s0063 10.0kb downstream 10.0kb downstream 11889 true Scaffold495: 199920-211808 Capsella grandiflora
Cagra.0495s0063 10.0kb downstream 10.0kb downstream 10000 false Scaffold495: 199920-209919 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375730 5261 Brassicaceae View MSA
123840379 5264 Brassicales-Malvales View MSA
124340180 5266 SBM View MSA
124241353 5268 Malvidae View MSA
124071196 5270 Rosid View MSA
123751251 5271 Pentapetalae View MSA
122786571 5272 Eudicot View MSA
122048548 5273 Angiosperm View MSA
121350329 5274 Embryophyte View MSA
123426511 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain