Gene : Cagra.0503s0005 C. grandiflora v1.1
Defline:  (1 of 4) PTHR11746:SF89 - MAF-LIKE PROTEIN Genomic Order:  5
Name:  ? Cagra.0503s0005 Secondary Identifier:  ? PAC:28915347
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0503s0005 0.5kb upstream 0.5kb upstream 2721 true Scaffold503: 18739-21459 Capsella grandiflora
Cagra.0503s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold503: 18739-19238 Capsella grandiflora
Cagra.0503s0005 0.5kb downstream 0.5kb downstream 2721 true Scaffold503: 19239-21959 Capsella grandiflora
Cagra.0503s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold503: 21460-21959 Capsella grandiflora
Cagra.0503s0005 1.0kb upstream 1.0kb upstream 3221 true Scaffold503: 18239-21459 Capsella grandiflora
Cagra.0503s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold503: 18239-19238 Capsella grandiflora
Cagra.0503s0005 1.0kb downstream 1.0kb downstream 3221 true Scaffold503: 19239-22459 Capsella grandiflora
Cagra.0503s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold503: 21460-22459 Capsella grandiflora
Cagra.0503s0005 2.0kb upstream 2.0kb upstream 4221 true Scaffold503: 17239-21459 Capsella grandiflora
Cagra.0503s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold503: 17239-19238 Capsella grandiflora
Cagra.0503s0005 2.0kb downstream 2.0kb downstream 4221 true Scaffold503: 19239-23459 Capsella grandiflora
Cagra.0503s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold503: 21460-23459 Capsella grandiflora
Cagra.0503s0005 5.0kb upstream 5.0kb upstream 7221 true Scaffold503: 14239-21459 Capsella grandiflora
Cagra.0503s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold503: 14239-19238 Capsella grandiflora
Cagra.0503s0005 5.0kb downstream 5.0kb downstream 7221 true Scaffold503: 19239-26459 Capsella grandiflora
Cagra.0503s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold503: 21460-26459 Capsella grandiflora
Cagra.0503s0005 10.0kb upstream 10.0kb upstream 12221 true Scaffold503: 9239-21459 Capsella grandiflora
Cagra.0503s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold503: 9239-19238 Capsella grandiflora
Cagra.0503s0005 10.0kb downstream 10.0kb downstream 12221 true Scaffold503: 19239-31459 Capsella grandiflora
Cagra.0503s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold503: 21460-31459 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370538 5261 Brassicaceae View MSA
123838373 5264 Brassicales-Malvales View MSA
124346753 5266 SBM View MSA
124237602 5268 Malvidae View MSA
124061163 5270 Rosid View MSA
123742079 5271 Pentapetalae View MSA
122790099 5272 Eudicot View MSA
122045669 5273 Angiosperm View MSA
121347130 5274 Embryophyte View MSA
123427064 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain