Gene : Cagra.0531s0004 C. grandiflora v1.1
Defline:  (1 of 11) PF05212 - Protein of unknown function (DUF707) (DUF707) Genomic Order:  4
Name:  ? Cagra.0531s0004 Secondary Identifier:  ? PAC:28909517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0531s0004 0.5kb upstream 0.5kb upstream 4201 true Scaffold531: 7574-11774 Capsella grandiflora
Cagra.0531s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold531: 7574-8073 Capsella grandiflora
Cagra.0531s0004 0.5kb downstream 0.5kb downstream 4201 true Scaffold531: 8074-12274 Capsella grandiflora
Cagra.0531s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold531: 11775-12274 Capsella grandiflora
Cagra.0531s0004 1.0kb upstream 1.0kb upstream 4701 true Scaffold531: 7074-11774 Capsella grandiflora
Cagra.0531s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold531: 7074-8073 Capsella grandiflora
Cagra.0531s0004 1.0kb downstream 1.0kb downstream 4701 true Scaffold531: 8074-12774 Capsella grandiflora
Cagra.0531s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold531: 11775-12774 Capsella grandiflora
Cagra.0531s0004 2.0kb upstream 2.0kb upstream 5701 true Scaffold531: 6074-11774 Capsella grandiflora
Cagra.0531s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold531: 6074-8073 Capsella grandiflora
Cagra.0531s0004 2.0kb downstream 2.0kb downstream 5701 true Scaffold531: 8074-13774 Capsella grandiflora
Cagra.0531s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold531: 11775-13774 Capsella grandiflora
Cagra.0531s0004 5.0kb upstream 5.0kb upstream 8701 true Scaffold531: 3074-11774 Capsella grandiflora
Cagra.0531s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold531: 3074-8073 Capsella grandiflora
Cagra.0531s0004 5.0kb downstream 5.0kb downstream 8701 true Scaffold531: 8074-16774 Capsella grandiflora
Cagra.0531s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold531: 11775-16774 Capsella grandiflora
Cagra.0531s0004 10.0kb upstream 10.0kb upstream 11774 true Scaffold531: 1-11774 Capsella grandiflora
Cagra.0531s0004 10.0kb upstream 10.0kb upstream 8073 false Scaffold531: 1-8073 Capsella grandiflora
Cagra.0531s0004 10.0kb downstream 10.0kb downstream 13701 true Scaffold531: 8074-21774 Capsella grandiflora
Cagra.0531s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold531: 11775-21774 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362716 5261 Brassicaceae View MSA
123838442 5264 Brassicales-Malvales View MSA
124347021 5266 SBM View MSA
124247841 5268 Malvidae View MSA
124068224 5270 Rosid View MSA
123742371 5271 Pentapetalae View MSA
122797381 5272 Eudicot View MSA
122046740 5273 Angiosperm View MSA
121347735 5274 Embryophyte View MSA
123426523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain