Gene : Cagra.0483s0043 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23339 - TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE Genomic Order:  43
Name:  ? Cagra.0483s0043 Secondary Identifier:  ? PAC:28900458
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0483s0043 0.5kb upstream 0.5kb upstream 7332 true Scaffold483: 130659-137990 Capsella grandiflora
Cagra.0483s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold483: 137491-137990 Capsella grandiflora
Cagra.0483s0043 0.5kb downstream 0.5kb downstream 7332 true Scaffold483: 130159-137490 Capsella grandiflora
Cagra.0483s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold483: 130159-130658 Capsella grandiflora
Cagra.0483s0043 1.0kb upstream 1.0kb upstream 7832 true Scaffold483: 130659-138490 Capsella grandiflora
Cagra.0483s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold483: 137491-138490 Capsella grandiflora
Cagra.0483s0043 1.0kb downstream 1.0kb downstream 7832 true Scaffold483: 129659-137490 Capsella grandiflora
Cagra.0483s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold483: 129659-130658 Capsella grandiflora
Cagra.0483s0043 2.0kb upstream 2.0kb upstream 8832 true Scaffold483: 130659-139490 Capsella grandiflora
Cagra.0483s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold483: 137491-139490 Capsella grandiflora
Cagra.0483s0043 2.0kb downstream 2.0kb downstream 8832 true Scaffold483: 128659-137490 Capsella grandiflora
Cagra.0483s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold483: 128659-130658 Capsella grandiflora
Cagra.0483s0043 5.0kb upstream 5.0kb upstream 11832 true Scaffold483: 130659-142490 Capsella grandiflora
Cagra.0483s0043 5.0kb upstream 5.0kb upstream 5000 false Scaffold483: 137491-142490 Capsella grandiflora
Cagra.0483s0043 5.0kb downstream 5.0kb downstream 11832 true Scaffold483: 125659-137490 Capsella grandiflora
Cagra.0483s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold483: 125659-130658 Capsella grandiflora
Cagra.0483s0043 10.0kb upstream 10.0kb upstream 16832 true Scaffold483: 130659-147490 Capsella grandiflora
Cagra.0483s0043 10.0kb upstream 10.0kb upstream 10000 false Scaffold483: 137491-147490 Capsella grandiflora
Cagra.0483s0043 10.0kb downstream 10.0kb downstream 16832 true Scaffold483: 120659-137490 Capsella grandiflora
Cagra.0483s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold483: 120659-130658 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375061 5261 Brassicaceae View MSA
123839141 5264 Brassicales-Malvales View MSA
124337759 5266 SBM View MSA
124240046 5268 Malvidae View MSA
124064343 5270 Rosid View MSA
123736894 5271 Pentapetalae View MSA
122792076 5272 Eudicot View MSA
122046050 5273 Angiosperm View MSA
121344285 5274 Embryophyte View MSA
123426965 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain