Gene : Cagra.0483s0085 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11588:SF7 - TUBULIN GAMMA CHAIN Genomic Order:  85
Name:  ? Cagra.0483s0085 Secondary Identifier:  ? PAC:28900463
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5695 Capsella grandiflora pathologic  
Cgrandiflora PWY-6608 Capsella grandiflora pathologic  
Cgrandiflora PWY-6609 Capsella grandiflora pathologic  
Cgrandiflora PWY-7179 Capsella grandiflora pathologic  
Cgrandiflora SALVADEHYPOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0483s0085 0.5kb upstream 0.5kb upstream 3810 true Scaffold483: 304235-308044 Capsella grandiflora
Cagra.0483s0085 0.5kb upstream 0.5kb upstream 500 false Scaffold483: 304235-304734 Capsella grandiflora
Cagra.0483s0085 0.5kb downstream 0.5kb downstream 3810 true Scaffold483: 304735-308544 Capsella grandiflora
Cagra.0483s0085 0.5kb downstream 0.5kb downstream 500 false Scaffold483: 308045-308544 Capsella grandiflora
Cagra.0483s0085 1.0kb upstream 1.0kb upstream 4310 true Scaffold483: 303735-308044 Capsella grandiflora
Cagra.0483s0085 1.0kb upstream 1.0kb upstream 1000 false Scaffold483: 303735-304734 Capsella grandiflora
Cagra.0483s0085 1.0kb downstream 1.0kb downstream 4310 true Scaffold483: 304735-309044 Capsella grandiflora
Cagra.0483s0085 1.0kb downstream 1.0kb downstream 1000 false Scaffold483: 308045-309044 Capsella grandiflora
Cagra.0483s0085 2.0kb upstream 2.0kb upstream 5310 true Scaffold483: 302735-308044 Capsella grandiflora
Cagra.0483s0085 2.0kb upstream 2.0kb upstream 2000 false Scaffold483: 302735-304734 Capsella grandiflora
Cagra.0483s0085 2.0kb downstream 2.0kb downstream 5310 true Scaffold483: 304735-310044 Capsella grandiflora
Cagra.0483s0085 2.0kb downstream 2.0kb downstream 2000 false Scaffold483: 308045-310044 Capsella grandiflora
Cagra.0483s0085 5.0kb upstream 5.0kb upstream 8310 true Scaffold483: 299735-308044 Capsella grandiflora
Cagra.0483s0085 5.0kb upstream 5.0kb upstream 5000 false Scaffold483: 299735-304734 Capsella grandiflora
Cagra.0483s0085 5.0kb downstream 5.0kb downstream 8310 true Scaffold483: 304735-313044 Capsella grandiflora
Cagra.0483s0085 5.0kb downstream 5.0kb downstream 5000 false Scaffold483: 308045-313044 Capsella grandiflora
Cagra.0483s0085 10.0kb upstream 10.0kb upstream 13310 true Scaffold483: 294735-308044 Capsella grandiflora
Cagra.0483s0085 10.0kb upstream 10.0kb upstream 10000 false Scaffold483: 294735-304734 Capsella grandiflora
Cagra.0483s0085 10.0kb downstream 10.0kb downstream 13310 true Scaffold483: 304735-318044 Capsella grandiflora
Cagra.0483s0085 10.0kb downstream 10.0kb downstream 10000 false Scaffold483: 308045-318044 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380888 5261 Brassicaceae View MSA
123836063 5264 Brassicales-Malvales View MSA
124337609 5266 SBM View MSA
124248076 5268 Malvidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain