Gene : Cagra.0487s0003 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10114 - 60S RIBOSOMAL PROTEIN L36 Genomic Order:  3
Name:  ? Cagra.0487s0003 Secondary Identifier:  ? PAC:28895879
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0487s0003 0.5kb upstream 0.5kb upstream 1979 true Scaffold487: 12682-14660 Capsella grandiflora
Cagra.0487s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold487: 14161-14660 Capsella grandiflora
Cagra.0487s0003 0.5kb downstream 0.5kb downstream 1979 true Scaffold487: 12182-14160 Capsella grandiflora
Cagra.0487s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold487: 12182-12681 Capsella grandiflora
Cagra.0487s0003 1.0kb upstream 1.0kb upstream 2479 true Scaffold487: 12682-15160 Capsella grandiflora
Cagra.0487s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold487: 14161-15160 Capsella grandiflora
Cagra.0487s0003 1.0kb downstream 1.0kb downstream 2479 true Scaffold487: 11682-14160 Capsella grandiflora
Cagra.0487s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold487: 11682-12681 Capsella grandiflora
Cagra.0487s0003 2.0kb upstream 2.0kb upstream 3479 true Scaffold487: 12682-16160 Capsella grandiflora
Cagra.0487s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold487: 14161-16160 Capsella grandiflora
Cagra.0487s0003 2.0kb downstream 2.0kb downstream 3479 true Scaffold487: 10682-14160 Capsella grandiflora
Cagra.0487s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold487: 10682-12681 Capsella grandiflora
Cagra.0487s0003 5.0kb upstream 5.0kb upstream 6479 true Scaffold487: 12682-19160 Capsella grandiflora
Cagra.0487s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold487: 14161-19160 Capsella grandiflora
Cagra.0487s0003 5.0kb downstream 5.0kb downstream 6479 true Scaffold487: 7682-14160 Capsella grandiflora
Cagra.0487s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold487: 7682-12681 Capsella grandiflora
Cagra.0487s0003 10.0kb upstream 10.0kb upstream 11479 true Scaffold487: 12682-24160 Capsella grandiflora
Cagra.0487s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold487: 14161-24160 Capsella grandiflora
Cagra.0487s0003 10.0kb downstream 10.0kb downstream 11479 true Scaffold487: 2682-14160 Capsella grandiflora
Cagra.0487s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold487: 2682-12681 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338204 5261 Brassicaceae View MSA
123778814 5264 Brassicales-Malvales View MSA
124350395 5266 SBM View MSA
124242762 5268 Malvidae View MSA
124066905 5270 Rosid View MSA
123747585 5271 Pentapetalae View MSA
122796759 5272 Eudicot View MSA
122049276 5273 Angiosperm View MSA
121349373 5274 Embryophyte View MSA
123424507 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain