Gene : Cagra.0487s0017 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31867:SF5 - EXPANSIN-A16-RELATED Genomic Order:  17
Name:  ? Cagra.0487s0017 Secondary Identifier:  ? PAC:28895871
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0487s0017 0.5kb upstream 0.5kb upstream 2891 true Scaffold487: 73356-76246 Capsella grandiflora
Cagra.0487s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold487: 75747-76246 Capsella grandiflora
Cagra.0487s0017 0.5kb downstream 0.5kb downstream 2891 true Scaffold487: 72856-75746 Capsella grandiflora
Cagra.0487s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold487: 72856-73355 Capsella grandiflora
Cagra.0487s0017 1.0kb upstream 1.0kb upstream 3391 true Scaffold487: 73356-76746 Capsella grandiflora
Cagra.0487s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold487: 75747-76746 Capsella grandiflora
Cagra.0487s0017 1.0kb downstream 1.0kb downstream 3391 true Scaffold487: 72356-75746 Capsella grandiflora
Cagra.0487s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold487: 72356-73355 Capsella grandiflora
Cagra.0487s0017 2.0kb upstream 2.0kb upstream 4391 true Scaffold487: 73356-77746 Capsella grandiflora
Cagra.0487s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold487: 75747-77746 Capsella grandiflora
Cagra.0487s0017 2.0kb downstream 2.0kb downstream 4391 true Scaffold487: 71356-75746 Capsella grandiflora
Cagra.0487s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold487: 71356-73355 Capsella grandiflora
Cagra.0487s0017 5.0kb upstream 5.0kb upstream 7391 true Scaffold487: 73356-80746 Capsella grandiflora
Cagra.0487s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold487: 75747-80746 Capsella grandiflora
Cagra.0487s0017 5.0kb downstream 5.0kb downstream 7391 true Scaffold487: 68356-75746 Capsella grandiflora
Cagra.0487s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold487: 68356-73355 Capsella grandiflora
Cagra.0487s0017 10.0kb upstream 10.0kb upstream 12391 true Scaffold487: 73356-85746 Capsella grandiflora
Cagra.0487s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold487: 75747-85746 Capsella grandiflora
Cagra.0487s0017 10.0kb downstream 10.0kb downstream 12391 true Scaffold487: 63356-75746 Capsella grandiflora
Cagra.0487s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold487: 63356-73355 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372154 5261 Brassicaceae View MSA
123800307 5264 Brassicales-Malvales View MSA
124297735 5266 SBM View MSA
124249607 5268 Malvidae View MSA
124071064 5270 Rosid View MSA
123750763 5271 Pentapetalae View MSA
122796391 5272 Eudicot View MSA
122047888 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain