Gene : Cagra.0434s0059 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23075:SF0 - ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  59
Name:  ? Cagra.0434s0059 Secondary Identifier:  ? PAC:28897341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0434s0059 0.5kb upstream 0.5kb upstream 3976 true Scaffold434: 213094-217069 Capsella grandiflora
Cagra.0434s0059 0.5kb upstream 0.5kb upstream 500 false Scaffold434: 213094-213593 Capsella grandiflora
Cagra.0434s0059 0.5kb downstream 0.5kb downstream 3976 true Scaffold434: 213594-217569 Capsella grandiflora
Cagra.0434s0059 0.5kb downstream 0.5kb downstream 500 false Scaffold434: 217070-217569 Capsella grandiflora
Cagra.0434s0059 1.0kb upstream 1.0kb upstream 4476 true Scaffold434: 212594-217069 Capsella grandiflora
Cagra.0434s0059 1.0kb upstream 1.0kb upstream 1000 false Scaffold434: 212594-213593 Capsella grandiflora
Cagra.0434s0059 1.0kb downstream 1.0kb downstream 4476 true Scaffold434: 213594-218069 Capsella grandiflora
Cagra.0434s0059 1.0kb downstream 1.0kb downstream 1000 false Scaffold434: 217070-218069 Capsella grandiflora
Cagra.0434s0059 2.0kb upstream 2.0kb upstream 5476 true Scaffold434: 211594-217069 Capsella grandiflora
Cagra.0434s0059 2.0kb upstream 2.0kb upstream 2000 false Scaffold434: 211594-213593 Capsella grandiflora
Cagra.0434s0059 2.0kb downstream 2.0kb downstream 5476 true Scaffold434: 213594-219069 Capsella grandiflora
Cagra.0434s0059 2.0kb downstream 2.0kb downstream 2000 false Scaffold434: 217070-219069 Capsella grandiflora
Cagra.0434s0059 5.0kb upstream 5.0kb upstream 8476 true Scaffold434: 208594-217069 Capsella grandiflora
Cagra.0434s0059 5.0kb upstream 5.0kb upstream 5000 false Scaffold434: 208594-213593 Capsella grandiflora
Cagra.0434s0059 5.0kb downstream 5.0kb downstream 8476 true Scaffold434: 213594-222069 Capsella grandiflora
Cagra.0434s0059 5.0kb downstream 5.0kb downstream 5000 false Scaffold434: 217070-222069 Capsella grandiflora
Cagra.0434s0059 10.0kb upstream 10.0kb upstream 13476 true Scaffold434: 203594-217069 Capsella grandiflora
Cagra.0434s0059 10.0kb upstream 10.0kb upstream 10000 false Scaffold434: 203594-213593 Capsella grandiflora
Cagra.0434s0059 10.0kb downstream 10.0kb downstream 13476 true Scaffold434: 213594-227069 Capsella grandiflora
Cagra.0434s0059 10.0kb downstream 10.0kb downstream 10000 false Scaffold434: 217070-227069 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369070 5261 Brassicaceae View MSA
123836696 5264 Brassicales-Malvales View MSA
124336969 5266 SBM View MSA
124240183 5268 Malvidae View MSA
124062064 5270 Rosid View MSA
123743451 5271 Pentapetalae View MSA
122787141 5272 Eudicot View MSA
122051121 5273 Angiosperm View MSA
121347220 5274 Embryophyte View MSA
123424543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain