Gene : Cagra.0456s0006 C. grandiflora v1.1
Defline:  (1 of 2) 4.1.1.36 - Phosphopantothenoylcysteine decarboxylase / N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase Genomic Order:  6
Name:  ? Cagra.0456s0006 Secondary Identifier:  ? PAC:28894503
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora COA-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0456s0006 0.5kb upstream 0.5kb upstream 1646 true Scaffold456: 24349-25994 Capsella grandiflora
Cagra.0456s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold456: 24349-24848 Capsella grandiflora
Cagra.0456s0006 0.5kb downstream 0.5kb downstream 1646 true Scaffold456: 24849-26494 Capsella grandiflora
Cagra.0456s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold456: 25995-26494 Capsella grandiflora
Cagra.0456s0006 1.0kb upstream 1.0kb upstream 2146 true Scaffold456: 23849-25994 Capsella grandiflora
Cagra.0456s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold456: 23849-24848 Capsella grandiflora
Cagra.0456s0006 1.0kb downstream 1.0kb downstream 2146 true Scaffold456: 24849-26994 Capsella grandiflora
Cagra.0456s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold456: 25995-26994 Capsella grandiflora
Cagra.0456s0006 2.0kb upstream 2.0kb upstream 3146 true Scaffold456: 22849-25994 Capsella grandiflora
Cagra.0456s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold456: 22849-24848 Capsella grandiflora
Cagra.0456s0006 2.0kb downstream 2.0kb downstream 3146 true Scaffold456: 24849-27994 Capsella grandiflora
Cagra.0456s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold456: 25995-27994 Capsella grandiflora
Cagra.0456s0006 5.0kb upstream 5.0kb upstream 6146 true Scaffold456: 19849-25994 Capsella grandiflora
Cagra.0456s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold456: 19849-24848 Capsella grandiflora
Cagra.0456s0006 5.0kb downstream 5.0kb downstream 6146 true Scaffold456: 24849-30994 Capsella grandiflora
Cagra.0456s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold456: 25995-30994 Capsella grandiflora
Cagra.0456s0006 10.0kb upstream 10.0kb upstream 11146 true Scaffold456: 14849-25994 Capsella grandiflora
Cagra.0456s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold456: 14849-24848 Capsella grandiflora
Cagra.0456s0006 10.0kb downstream 10.0kb downstream 11146 true Scaffold456: 24849-35994 Capsella grandiflora
Cagra.0456s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold456: 25995-35994 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361145 5261 Brassicaceae View MSA
123840077 5264 Brassicales-Malvales View MSA
124350306 5266 SBM View MSA
124242007 5268 Malvidae View MSA
124065086 5270 Rosid View MSA
123739959 5271 Pentapetalae View MSA
122787988 5272 Eudicot View MSA
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain