Gene : Cagra.0456s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10091//PTHR10091:SF8 - ALDOSE-1-EPIMERASE Genomic Order:  13
Name:  ? Cagra.0456s0013 Secondary Identifier:  ? PAC:28894511
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY66-422 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0456s0013 0.5kb upstream 0.5kb upstream 2263 true Scaffold456: 51278-53540 Capsella grandiflora
Cagra.0456s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold456: 51278-51777 Capsella grandiflora
Cagra.0456s0013 0.5kb downstream 0.5kb downstream 2263 true Scaffold456: 51778-54040 Capsella grandiflora
Cagra.0456s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold456: 53541-54040 Capsella grandiflora
Cagra.0456s0013 1.0kb upstream 1.0kb upstream 2763 true Scaffold456: 50778-53540 Capsella grandiflora
Cagra.0456s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold456: 50778-51777 Capsella grandiflora
Cagra.0456s0013 1.0kb downstream 1.0kb downstream 2763 true Scaffold456: 51778-54540 Capsella grandiflora
Cagra.0456s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold456: 53541-54540 Capsella grandiflora
Cagra.0456s0013 2.0kb upstream 2.0kb upstream 3763 true Scaffold456: 49778-53540 Capsella grandiflora
Cagra.0456s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold456: 49778-51777 Capsella grandiflora
Cagra.0456s0013 2.0kb downstream 2.0kb downstream 3763 true Scaffold456: 51778-55540 Capsella grandiflora
Cagra.0456s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold456: 53541-55540 Capsella grandiflora
Cagra.0456s0013 5.0kb upstream 5.0kb upstream 6763 true Scaffold456: 46778-53540 Capsella grandiflora
Cagra.0456s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold456: 46778-51777 Capsella grandiflora
Cagra.0456s0013 5.0kb downstream 5.0kb downstream 6763 true Scaffold456: 51778-58540 Capsella grandiflora
Cagra.0456s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold456: 53541-58540 Capsella grandiflora
Cagra.0456s0013 10.0kb upstream 10.0kb upstream 11763 true Scaffold456: 41778-53540 Capsella grandiflora
Cagra.0456s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold456: 41778-51777 Capsella grandiflora
Cagra.0456s0013 10.0kb downstream 10.0kb downstream 11763 true Scaffold456: 51778-63540 Capsella grandiflora
Cagra.0456s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold456: 53541-63540 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368169 5261 Brassicaceae View MSA
123828040 5264 Brassicales-Malvales View MSA
124342660 5266 SBM View MSA
124251209 5268 Malvidae View MSA
124068882 5270 Rosid View MSA
123737067 5271 Pentapetalae View MSA
122789360 5272 Eudicot View MSA
122043649 5273 Angiosperm View MSA
121346493 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain