Gene : Cagra.0463s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23180:SF253 - CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  3
Name:  ? Cagra.0463s0003 Secondary Identifier:  ? PAC:28915238
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0463s0003 0.5kb upstream 0.5kb upstream 1538 true Scaffold463: 14518-16055 Capsella grandiflora
Cagra.0463s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold463: 15556-16055 Capsella grandiflora
Cagra.0463s0003 0.5kb downstream 0.5kb downstream 1538 true Scaffold463: 14018-15555 Capsella grandiflora
Cagra.0463s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold463: 14018-14517 Capsella grandiflora
Cagra.0463s0003 1.0kb upstream 1.0kb upstream 2038 true Scaffold463: 14518-16555 Capsella grandiflora
Cagra.0463s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold463: 15556-16555 Capsella grandiflora
Cagra.0463s0003 1.0kb downstream 1.0kb downstream 2038 true Scaffold463: 13518-15555 Capsella grandiflora
Cagra.0463s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold463: 13518-14517 Capsella grandiflora
Cagra.0463s0003 2.0kb upstream 2.0kb upstream 3038 true Scaffold463: 14518-17555 Capsella grandiflora
Cagra.0463s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold463: 15556-17555 Capsella grandiflora
Cagra.0463s0003 2.0kb downstream 2.0kb downstream 3038 true Scaffold463: 12518-15555 Capsella grandiflora
Cagra.0463s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold463: 12518-14517 Capsella grandiflora
Cagra.0463s0003 5.0kb upstream 5.0kb upstream 6038 true Scaffold463: 14518-20555 Capsella grandiflora
Cagra.0463s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold463: 15556-20555 Capsella grandiflora
Cagra.0463s0003 5.0kb downstream 5.0kb downstream 6038 true Scaffold463: 9518-15555 Capsella grandiflora
Cagra.0463s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold463: 9518-14517 Capsella grandiflora
Cagra.0463s0003 10.0kb upstream 10.0kb upstream 11038 true Scaffold463: 14518-25555 Capsella grandiflora
Cagra.0463s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold463: 15556-25555 Capsella grandiflora
Cagra.0463s0003 10.0kb downstream 10.0kb downstream 11038 true Scaffold463: 4518-15555 Capsella grandiflora
Cagra.0463s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold463: 4518-14517 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368564 5261 Brassicaceae View MSA
123799604 5264 Brassicales-Malvales View MSA
124297106 5266 SBM View MSA
124149081 5268 Malvidae View MSA
123874959 5270 Rosid View MSA
123747243 5271 Pentapetalae View MSA
122796022 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain