Gene : Cagra.0483s0031 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13495 - NEFA-INTERACTING NUCLEAR PROTEIN NIP30 Genomic Order:  31
Name:  ? Cagra.0483s0031 Secondary Identifier:  ? PAC:28900432
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0483s0031 0.5kb upstream 0.5kb upstream 2171 true Scaffold483: 90628-92798 Capsella grandiflora
Cagra.0483s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold483: 92299-92798 Capsella grandiflora
Cagra.0483s0031 0.5kb downstream 0.5kb downstream 2171 true Scaffold483: 90128-92298 Capsella grandiflora
Cagra.0483s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold483: 90128-90627 Capsella grandiflora
Cagra.0483s0031 1.0kb upstream 1.0kb upstream 2671 true Scaffold483: 90628-93298 Capsella grandiflora
Cagra.0483s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold483: 92299-93298 Capsella grandiflora
Cagra.0483s0031 1.0kb downstream 1.0kb downstream 2671 true Scaffold483: 89628-92298 Capsella grandiflora
Cagra.0483s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold483: 89628-90627 Capsella grandiflora
Cagra.0483s0031 2.0kb upstream 2.0kb upstream 3671 true Scaffold483: 90628-94298 Capsella grandiflora
Cagra.0483s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold483: 92299-94298 Capsella grandiflora
Cagra.0483s0031 2.0kb downstream 2.0kb downstream 3671 true Scaffold483: 88628-92298 Capsella grandiflora
Cagra.0483s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold483: 88628-90627 Capsella grandiflora
Cagra.0483s0031 5.0kb upstream 5.0kb upstream 6671 true Scaffold483: 90628-97298 Capsella grandiflora
Cagra.0483s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold483: 92299-97298 Capsella grandiflora
Cagra.0483s0031 5.0kb downstream 5.0kb downstream 6671 true Scaffold483: 85628-92298 Capsella grandiflora
Cagra.0483s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold483: 85628-90627 Capsella grandiflora
Cagra.0483s0031 10.0kb upstream 10.0kb upstream 11671 true Scaffold483: 90628-102298 Capsella grandiflora
Cagra.0483s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold483: 92299-102298 Capsella grandiflora
Cagra.0483s0031 10.0kb downstream 10.0kb downstream 11671 true Scaffold483: 80628-92298 Capsella grandiflora
Cagra.0483s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold483: 80628-90627 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366192 5261 Brassicaceae View MSA
123830029 5264 Brassicales-Malvales View MSA
124343062 5266 SBM View MSA
124241413 5268 Malvidae View MSA
124063271 5270 Rosid View MSA
123737480 5271 Pentapetalae View MSA
122787094 5272 Eudicot View MSA
122047119 5273 Angiosperm View MSA
121346332 5274 Embryophyte View MSA
123425229 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain