Gene : Cagra.0645s0018 C. grandiflora v1.1
Defline:  (1 of 4) PTHR31225:SF15 - ALPHA-HUMULENE/(-)-(E)-BETA-CARYOPHYLLENE SYNTHASE Genomic Order:  18
Name:  ? Cagra.0645s0018 Secondary Identifier:  ? PAC:28896894
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0645s0018 0.5kb upstream 0.5kb upstream 1156 true Scaffold645: 62746-63901 Capsella grandiflora
Cagra.0645s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold645: 62746-63245 Capsella grandiflora
Cagra.0645s0018 0.5kb downstream 0.5kb downstream 1156 true Scaffold645: 63246-64401 Capsella grandiflora
Cagra.0645s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold645: 63902-64401 Capsella grandiflora
Cagra.0645s0018 1.0kb upstream 1.0kb upstream 1656 true Scaffold645: 62246-63901 Capsella grandiflora
Cagra.0645s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold645: 62246-63245 Capsella grandiflora
Cagra.0645s0018 1.0kb downstream 1.0kb downstream 1656 true Scaffold645: 63246-64901 Capsella grandiflora
Cagra.0645s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold645: 63902-64901 Capsella grandiflora
Cagra.0645s0018 2.0kb upstream 2.0kb upstream 2656 true Scaffold645: 61246-63901 Capsella grandiflora
Cagra.0645s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold645: 61246-63245 Capsella grandiflora
Cagra.0645s0018 2.0kb downstream 2.0kb downstream 2656 true Scaffold645: 63246-65901 Capsella grandiflora
Cagra.0645s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold645: 63902-65901 Capsella grandiflora
Cagra.0645s0018 5.0kb upstream 5.0kb upstream 5656 true Scaffold645: 58246-63901 Capsella grandiflora
Cagra.0645s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold645: 58246-63245 Capsella grandiflora
Cagra.0645s0018 5.0kb downstream 5.0kb downstream 5656 true Scaffold645: 63246-68901 Capsella grandiflora
Cagra.0645s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold645: 63902-68901 Capsella grandiflora
Cagra.0645s0018 10.0kb upstream 10.0kb upstream 10656 true Scaffold645: 53246-63901 Capsella grandiflora
Cagra.0645s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold645: 53246-63245 Capsella grandiflora
Cagra.0645s0018 10.0kb downstream 10.0kb downstream 10656 true Scaffold645: 63246-73901 Capsella grandiflora
Cagra.0645s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold645: 63902-73901 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380444 5261 Brassicaceae View MSA
123841293 5264 Brassicales-Malvales View MSA
124322885 5266 SBM View MSA
124254682 5268 Malvidae View MSA
124074530 5270 Rosid View MSA
123753426 5271 Pentapetalae View MSA
122797901 5272 Eudicot View MSA
122051661 5273 Angiosperm View MSA
121351720 5274 Embryophyte View MSA
123382290 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain