Gene : Cagra.0645s0013 C. grandiflora v1.1
Defline:  (1 of 16) PF05055 - Protein of unknown function (DUF677) Genomic Order:  13
Name:  ? Cagra.0645s0013 Secondary Identifier:  ? PAC:28896923
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0645s0013 0.5kb upstream 0.5kb upstream 1729 true Scaffold645: 43420-45148 Capsella grandiflora
Cagra.0645s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold645: 44649-45148 Capsella grandiflora
Cagra.0645s0013 0.5kb downstream 0.5kb downstream 1729 true Scaffold645: 42920-44648 Capsella grandiflora
Cagra.0645s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold645: 42920-43419 Capsella grandiflora
Cagra.0645s0013 1.0kb upstream 1.0kb upstream 2229 true Scaffold645: 43420-45648 Capsella grandiflora
Cagra.0645s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold645: 44649-45648 Capsella grandiflora
Cagra.0645s0013 1.0kb downstream 1.0kb downstream 2229 true Scaffold645: 42420-44648 Capsella grandiflora
Cagra.0645s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold645: 42420-43419 Capsella grandiflora
Cagra.0645s0013 2.0kb upstream 2.0kb upstream 3229 true Scaffold645: 43420-46648 Capsella grandiflora
Cagra.0645s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold645: 44649-46648 Capsella grandiflora
Cagra.0645s0013 2.0kb downstream 2.0kb downstream 3229 true Scaffold645: 41420-44648 Capsella grandiflora
Cagra.0645s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold645: 41420-43419 Capsella grandiflora
Cagra.0645s0013 5.0kb upstream 5.0kb upstream 6229 true Scaffold645: 43420-49648 Capsella grandiflora
Cagra.0645s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold645: 44649-49648 Capsella grandiflora
Cagra.0645s0013 5.0kb downstream 5.0kb downstream 6229 true Scaffold645: 38420-44648 Capsella grandiflora
Cagra.0645s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold645: 38420-43419 Capsella grandiflora
Cagra.0645s0013 10.0kb upstream 10.0kb upstream 11229 true Scaffold645: 43420-54648 Capsella grandiflora
Cagra.0645s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold645: 44649-54648 Capsella grandiflora
Cagra.0645s0013 10.0kb downstream 10.0kb downstream 11229 true Scaffold645: 33420-44648 Capsella grandiflora
Cagra.0645s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold645: 33420-43419 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371233 5261 Brassicaceae View MSA
123836492 5264 Brassicales-Malvales View MSA
124340431 5266 SBM View MSA
124240755 5268 Malvidae View MSA
124070195 5270 Rosid View MSA
123749036 5271 Pentapetalae View MSA
122795133 5272 Eudicot View MSA
122051174 5273 Angiosperm View MSA
121347879 5274 Embryophyte View MSA
123380662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain