Gene : Cagra.0650s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR17130//PTHR17130:SF25 - MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25 Genomic Order:  4
Name:  ? Cagra.0650s0004 Secondary Identifier:  ? PAC:28920242
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0650s0004 0.5kb upstream 0.5kb upstream 1661 true Scaffold650: 9629-11289 Capsella grandiflora
Cagra.0650s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold650: 9629-10128 Capsella grandiflora
Cagra.0650s0004 0.5kb downstream 0.5kb downstream 1661 true Scaffold650: 10129-11789 Capsella grandiflora
Cagra.0650s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold650: 11290-11789 Capsella grandiflora
Cagra.0650s0004 1.0kb upstream 1.0kb upstream 2161 true Scaffold650: 9129-11289 Capsella grandiflora
Cagra.0650s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold650: 9129-10128 Capsella grandiflora
Cagra.0650s0004 1.0kb downstream 1.0kb downstream 2161 true Scaffold650: 10129-12289 Capsella grandiflora
Cagra.0650s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold650: 11290-12289 Capsella grandiflora
Cagra.0650s0004 2.0kb upstream 2.0kb upstream 3161 true Scaffold650: 8129-11289 Capsella grandiflora
Cagra.0650s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold650: 8129-10128 Capsella grandiflora
Cagra.0650s0004 2.0kb downstream 2.0kb downstream 3161 true Scaffold650: 10129-13289 Capsella grandiflora
Cagra.0650s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold650: 11290-13289 Capsella grandiflora
Cagra.0650s0004 5.0kb upstream 5.0kb upstream 6161 true Scaffold650: 5129-11289 Capsella grandiflora
Cagra.0650s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold650: 5129-10128 Capsella grandiflora
Cagra.0650s0004 5.0kb downstream 5.0kb downstream 6161 true Scaffold650: 10129-16289 Capsella grandiflora
Cagra.0650s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold650: 11290-16289 Capsella grandiflora
Cagra.0650s0004 10.0kb upstream 10.0kb upstream 11161 true Scaffold650: 129-11289 Capsella grandiflora
Cagra.0650s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold650: 129-10128 Capsella grandiflora
Cagra.0650s0004 10.0kb downstream 10.0kb downstream 11161 true Scaffold650: 10129-21289 Capsella grandiflora
Cagra.0650s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold650: 11290-21289 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363384 5261 Brassicaceae View MSA
123833428 5264 Brassicales-Malvales View MSA
124341661 5266 SBM View MSA
124241316 5268 Malvidae View MSA
124067897 5270 Rosid View MSA
123746981 5271 Pentapetalae View MSA
122786160 5272 Eudicot View MSA
122045376 5273 Angiosperm View MSA
121346766 5274 Embryophyte View MSA
123425626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain