Gene : Cagra.0664s0069 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11071:SF297 - CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN Genomic Order:  69
Name:  ? Cagra.0664s0069 Secondary Identifier:  ? PAC:28911747
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0664s0069 0.5kb upstream 0.5kb upstream 4563 true Scaffold664: 241165-245727 Capsella grandiflora
Cagra.0664s0069 0.5kb upstream 0.5kb upstream 500 false Scaffold664: 241165-241664 Capsella grandiflora
Cagra.0664s0069 0.5kb downstream 0.5kb downstream 4563 true Scaffold664: 241665-246227 Capsella grandiflora
Cagra.0664s0069 0.5kb downstream 0.5kb downstream 500 false Scaffold664: 245728-246227 Capsella grandiflora
Cagra.0664s0069 1.0kb upstream 1.0kb upstream 5063 true Scaffold664: 240665-245727 Capsella grandiflora
Cagra.0664s0069 1.0kb upstream 1.0kb upstream 1000 false Scaffold664: 240665-241664 Capsella grandiflora
Cagra.0664s0069 1.0kb downstream 1.0kb downstream 5063 true Scaffold664: 241665-246727 Capsella grandiflora
Cagra.0664s0069 1.0kb downstream 1.0kb downstream 1000 false Scaffold664: 245728-246727 Capsella grandiflora
Cagra.0664s0069 2.0kb upstream 2.0kb upstream 6063 true Scaffold664: 239665-245727 Capsella grandiflora
Cagra.0664s0069 2.0kb upstream 2.0kb upstream 2000 false Scaffold664: 239665-241664 Capsella grandiflora
Cagra.0664s0069 2.0kb downstream 2.0kb downstream 6063 true Scaffold664: 241665-247727 Capsella grandiflora
Cagra.0664s0069 2.0kb downstream 2.0kb downstream 2000 false Scaffold664: 245728-247727 Capsella grandiflora
Cagra.0664s0069 5.0kb upstream 5.0kb upstream 9063 true Scaffold664: 236665-245727 Capsella grandiflora
Cagra.0664s0069 5.0kb upstream 5.0kb upstream 5000 false Scaffold664: 236665-241664 Capsella grandiflora
Cagra.0664s0069 5.0kb downstream 5.0kb downstream 9063 true Scaffold664: 241665-250727 Capsella grandiflora
Cagra.0664s0069 5.0kb downstream 5.0kb downstream 5000 false Scaffold664: 245728-250727 Capsella grandiflora
Cagra.0664s0069 10.0kb upstream 10.0kb upstream 14063 true Scaffold664: 231665-245727 Capsella grandiflora
Cagra.0664s0069 10.0kb upstream 10.0kb upstream 10000 false Scaffold664: 231665-241664 Capsella grandiflora
Cagra.0664s0069 10.0kb downstream 10.0kb downstream 14063 true Scaffold664: 241665-255727 Capsella grandiflora
Cagra.0664s0069 10.0kb downstream 10.0kb downstream 10000 false Scaffold664: 245728-255727 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040927 5273 Angiosperm View MSA
122365058 5261 Brassicaceae View MSA
123828301 5264 Brassicales-Malvales View MSA
124345664 5266 SBM View MSA
124248052 5268 Malvidae View MSA
124068676 5270 Rosid View MSA
123740533 5271 Pentapetalae View MSA
122793652 5272 Eudicot View MSA
123428973 5275 Viridiplantae View MSA
121347265 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain