Gene : Cagra.0664s0035 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  35
Name:  ? Cagra.0664s0035 Secondary Identifier:  ? PAC:28911757
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7511 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0664s0035 0.5kb upstream 0.5kb upstream 2816 true Scaffold664: 101689-104504 Capsella grandiflora
Cagra.0664s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold664: 101689-102188 Capsella grandiflora
Cagra.0664s0035 0.5kb downstream 0.5kb downstream 2816 true Scaffold664: 102189-105004 Capsella grandiflora
Cagra.0664s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold664: 104505-105004 Capsella grandiflora
Cagra.0664s0035 1.0kb upstream 1.0kb upstream 3316 true Scaffold664: 101189-104504 Capsella grandiflora
Cagra.0664s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold664: 101189-102188 Capsella grandiflora
Cagra.0664s0035 1.0kb downstream 1.0kb downstream 3316 true Scaffold664: 102189-105504 Capsella grandiflora
Cagra.0664s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold664: 104505-105504 Capsella grandiflora
Cagra.0664s0035 2.0kb upstream 2.0kb upstream 4316 true Scaffold664: 100189-104504 Capsella grandiflora
Cagra.0664s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold664: 100189-102188 Capsella grandiflora
Cagra.0664s0035 2.0kb downstream 2.0kb downstream 4316 true Scaffold664: 102189-106504 Capsella grandiflora
Cagra.0664s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold664: 104505-106504 Capsella grandiflora
Cagra.0664s0035 5.0kb upstream 5.0kb upstream 7316 true Scaffold664: 97189-104504 Capsella grandiflora
Cagra.0664s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold664: 97189-102188 Capsella grandiflora
Cagra.0664s0035 5.0kb downstream 5.0kb downstream 7316 true Scaffold664: 102189-109504 Capsella grandiflora
Cagra.0664s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold664: 104505-109504 Capsella grandiflora
Cagra.0664s0035 10.0kb upstream 10.0kb upstream 12316 true Scaffold664: 92189-104504 Capsella grandiflora
Cagra.0664s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold664: 92189-102188 Capsella grandiflora
Cagra.0664s0035 10.0kb downstream 10.0kb downstream 12316 true Scaffold664: 102189-114504 Capsella grandiflora
Cagra.0664s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold664: 104505-114504 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370745 5261 Brassicaceae View MSA
123831380 5264 Brassicales-Malvales View MSA
124321725 5266 SBM View MSA
124239052 5268 Malvidae View MSA
124050337 5270 Rosid View MSA
123740873 5271 Pentapetalae View MSA
122769993 5272 Eudicot View MSA
122043981 5273 Angiosperm View MSA
123428990 5275 Viridiplantae View MSA
121310221 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain