Gene : Cagra.0629s0025 C. grandiflora v1.1
Defline:  (1 of 68) PTHR32212:SF112 - FBD / LEUCINE RICH REPEAT DOMAINS CONTAINING PROTEIN-RELATED Genomic Order:  25
Name:  ? Cagra.0629s0025 Secondary Identifier:  ? PAC:28919912
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0629s0025 0.5kb upstream 0.5kb upstream 2071 true Scaffold629: 85759-87829 Capsella grandiflora
Cagra.0629s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold629: 87330-87829 Capsella grandiflora
Cagra.0629s0025 0.5kb downstream 0.5kb downstream 2071 true Scaffold629: 85259-87329 Capsella grandiflora
Cagra.0629s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold629: 85259-85758 Capsella grandiflora
Cagra.0629s0025 1.0kb upstream 1.0kb upstream 2571 true Scaffold629: 85759-88329 Capsella grandiflora
Cagra.0629s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold629: 87330-88329 Capsella grandiflora
Cagra.0629s0025 1.0kb downstream 1.0kb downstream 2571 true Scaffold629: 84759-87329 Capsella grandiflora
Cagra.0629s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold629: 84759-85758 Capsella grandiflora
Cagra.0629s0025 2.0kb upstream 2.0kb upstream 3571 true Scaffold629: 85759-89329 Capsella grandiflora
Cagra.0629s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold629: 87330-89329 Capsella grandiflora
Cagra.0629s0025 2.0kb downstream 2.0kb downstream 3571 true Scaffold629: 83759-87329 Capsella grandiflora
Cagra.0629s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold629: 83759-85758 Capsella grandiflora
Cagra.0629s0025 5.0kb upstream 5.0kb upstream 4384 true Scaffold629: 85759-90142 Capsella grandiflora
Cagra.0629s0025 5.0kb upstream 5.0kb upstream 2813 false Scaffold629: 87330-90142 Capsella grandiflora
Cagra.0629s0025 5.0kb downstream 5.0kb downstream 6571 true Scaffold629: 80759-87329 Capsella grandiflora
Cagra.0629s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold629: 80759-85758 Capsella grandiflora
Cagra.0629s0025 10.0kb upstream 10.0kb upstream 4384 true Scaffold629: 85759-90142 Capsella grandiflora
Cagra.0629s0025 10.0kb upstream 10.0kb upstream 2813 false Scaffold629: 87330-90142 Capsella grandiflora
Cagra.0629s0025 10.0kb downstream 10.0kb downstream 11571 true Scaffold629: 75759-87329 Capsella grandiflora
Cagra.0629s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold629: 75759-85758 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378296 5261 Brassicaceae View MSA
123801816 5264 Brassicales-Malvales View MSA
124299074 5266 SBM View MSA
124150576 5268 Malvidae View MSA
123876166 5270 Rosid View MSA
123459877 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain