Gene : Cagra.0635s0024 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10371 - NADH DEHYDROGENASE UBIQUINONE FLAVOPROTEIN 2, MITOCHONDRIAL Genomic Order:  24
Name:  ? Cagra.0635s0024 Secondary Identifier:  ? PAC:28908387
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3781 Capsella grandiflora pathologic  
Cgrandiflora PWY-4302 Capsella grandiflora pathologic  
Cgrandiflora PWY-5083 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0635s0024 0.5kb upstream 0.5kb upstream 3355 true Scaffold635: 94026-97380 Capsella grandiflora
Cagra.0635s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold635: 96881-97380 Capsella grandiflora
Cagra.0635s0024 0.5kb downstream 0.5kb downstream 3355 true Scaffold635: 93526-96880 Capsella grandiflora
Cagra.0635s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold635: 93526-94025 Capsella grandiflora
Cagra.0635s0024 1.0kb upstream 1.0kb upstream 3855 true Scaffold635: 94026-97880 Capsella grandiflora
Cagra.0635s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold635: 96881-97880 Capsella grandiflora
Cagra.0635s0024 1.0kb downstream 1.0kb downstream 3855 true Scaffold635: 93026-96880 Capsella grandiflora
Cagra.0635s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold635: 93026-94025 Capsella grandiflora
Cagra.0635s0024 2.0kb upstream 2.0kb upstream 4855 true Scaffold635: 94026-98880 Capsella grandiflora
Cagra.0635s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold635: 96881-98880 Capsella grandiflora
Cagra.0635s0024 2.0kb downstream 2.0kb downstream 4855 true Scaffold635: 92026-96880 Capsella grandiflora
Cagra.0635s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold635: 92026-94025 Capsella grandiflora
Cagra.0635s0024 5.0kb upstream 5.0kb upstream 7855 true Scaffold635: 94026-101880 Capsella grandiflora
Cagra.0635s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold635: 96881-101880 Capsella grandiflora
Cagra.0635s0024 5.0kb downstream 5.0kb downstream 7855 true Scaffold635: 89026-96880 Capsella grandiflora
Cagra.0635s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold635: 89026-94025 Capsella grandiflora
Cagra.0635s0024 10.0kb upstream 10.0kb upstream 12855 true Scaffold635: 94026-106880 Capsella grandiflora
Cagra.0635s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold635: 96881-106880 Capsella grandiflora
Cagra.0635s0024 10.0kb downstream 10.0kb downstream 12855 true Scaffold635: 84026-96880 Capsella grandiflora
Cagra.0635s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold635: 84026-94025 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368476 5261 Brassicaceae View MSA
123830423 5264 Brassicales-Malvales View MSA
124338790 5266 SBM View MSA
124243026 5268 Malvidae View MSA
124065216 5270 Rosid View MSA
123739093 5271 Pentapetalae View MSA
122789216 5272 Eudicot View MSA
122047748 5273 Angiosperm View MSA
121350810 5274 Embryophyte View MSA
123425059 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain