Gene : Cagra.0635s0037 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10073:SF12 - MISMATCH REPAIR ENDONUCLEASE PMS2 Genomic Order:  37
Name:  ? Cagra.0635s0037 Secondary Identifier:  ? PAC:28908359
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0635s0037 0.5kb upstream 0.5kb upstream 5083 true Scaffold635: 143680-148762 Capsella grandiflora
Cagra.0635s0037 0.5kb upstream 0.5kb upstream 500 false Scaffold635: 143680-144179 Capsella grandiflora
Cagra.0635s0037 0.5kb downstream 0.5kb downstream 5083 true Scaffold635: 144180-149262 Capsella grandiflora
Cagra.0635s0037 0.5kb downstream 0.5kb downstream 500 false Scaffold635: 148763-149262 Capsella grandiflora
Cagra.0635s0037 1.0kb upstream 1.0kb upstream 5583 true Scaffold635: 143180-148762 Capsella grandiflora
Cagra.0635s0037 1.0kb upstream 1.0kb upstream 1000 false Scaffold635: 143180-144179 Capsella grandiflora
Cagra.0635s0037 1.0kb downstream 1.0kb downstream 5583 true Scaffold635: 144180-149762 Capsella grandiflora
Cagra.0635s0037 1.0kb downstream 1.0kb downstream 1000 false Scaffold635: 148763-149762 Capsella grandiflora
Cagra.0635s0037 2.0kb upstream 2.0kb upstream 6583 true Scaffold635: 142180-148762 Capsella grandiflora
Cagra.0635s0037 2.0kb upstream 2.0kb upstream 2000 false Scaffold635: 142180-144179 Capsella grandiflora
Cagra.0635s0037 2.0kb downstream 2.0kb downstream 6583 true Scaffold635: 144180-150762 Capsella grandiflora
Cagra.0635s0037 2.0kb downstream 2.0kb downstream 2000 false Scaffold635: 148763-150762 Capsella grandiflora
Cagra.0635s0037 5.0kb upstream 5.0kb upstream 9583 true Scaffold635: 139180-148762 Capsella grandiflora
Cagra.0635s0037 5.0kb upstream 5.0kb upstream 5000 false Scaffold635: 139180-144179 Capsella grandiflora
Cagra.0635s0037 5.0kb downstream 5.0kb downstream 9583 true Scaffold635: 144180-153762 Capsella grandiflora
Cagra.0635s0037 5.0kb downstream 5.0kb downstream 5000 false Scaffold635: 148763-153762 Capsella grandiflora
Cagra.0635s0037 10.0kb upstream 10.0kb upstream 14583 true Scaffold635: 134180-148762 Capsella grandiflora
Cagra.0635s0037 10.0kb upstream 10.0kb upstream 10000 false Scaffold635: 134180-144179 Capsella grandiflora
Cagra.0635s0037 10.0kb downstream 10.0kb downstream 14583 true Scaffold635: 144180-158762 Capsella grandiflora
Cagra.0635s0037 10.0kb downstream 10.0kb downstream 10000 false Scaffold635: 148763-158762 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369918 5261 Brassicaceae View MSA
123837618 5264 Brassicales-Malvales View MSA
124349730 5266 SBM View MSA
124239053 5268 Malvidae View MSA
124067579 5270 Rosid View MSA
123747689 5271 Pentapetalae View MSA
122789858 5272 Eudicot View MSA
122044481 5273 Angiosperm View MSA
121344102 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain