Gene : Cagra.0635s0046 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10459//PTHR10459:SF64 - DNA LIGASE Genomic Order:  46
Name:  ? Cagra.0635s0046 Secondary Identifier:  ? PAC:28908356
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0635s0046 0.5kb upstream 0.5kb upstream 4904 true Scaffold635: 172110-177013 Capsella grandiflora
Cagra.0635s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold635: 176514-177013 Capsella grandiflora
Cagra.0635s0046 0.5kb downstream 0.5kb downstream 4904 true Scaffold635: 171610-176513 Capsella grandiflora
Cagra.0635s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold635: 171610-172109 Capsella grandiflora
Cagra.0635s0046 1.0kb upstream 1.0kb upstream 5404 true Scaffold635: 172110-177513 Capsella grandiflora
Cagra.0635s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold635: 176514-177513 Capsella grandiflora
Cagra.0635s0046 1.0kb downstream 1.0kb downstream 5404 true Scaffold635: 171110-176513 Capsella grandiflora
Cagra.0635s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold635: 171110-172109 Capsella grandiflora
Cagra.0635s0046 2.0kb upstream 2.0kb upstream 6404 true Scaffold635: 172110-178513 Capsella grandiflora
Cagra.0635s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold635: 176514-178513 Capsella grandiflora
Cagra.0635s0046 2.0kb downstream 2.0kb downstream 6404 true Scaffold635: 170110-176513 Capsella grandiflora
Cagra.0635s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold635: 170110-172109 Capsella grandiflora
Cagra.0635s0046 5.0kb upstream 5.0kb upstream 9404 true Scaffold635: 172110-181513 Capsella grandiflora
Cagra.0635s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold635: 176514-181513 Capsella grandiflora
Cagra.0635s0046 5.0kb downstream 5.0kb downstream 9404 true Scaffold635: 167110-176513 Capsella grandiflora
Cagra.0635s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold635: 167110-172109 Capsella grandiflora
Cagra.0635s0046 10.0kb upstream 10.0kb upstream 14404 true Scaffold635: 172110-186513 Capsella grandiflora
Cagra.0635s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold635: 176514-186513 Capsella grandiflora
Cagra.0635s0046 10.0kb downstream 10.0kb downstream 14404 true Scaffold635: 162110-176513 Capsella grandiflora
Cagra.0635s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold635: 162110-172109 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366499 5261 Brassicaceae View MSA
123831690 5264 Brassicales-Malvales View MSA
124344570 5266 SBM View MSA
124243017 5268 Malvidae View MSA
124074369 5270 Rosid View MSA
123750076 5271 Pentapetalae View MSA
122797319 5272 Eudicot View MSA
122051365 5273 Angiosperm View MSA
121345540 5274 Embryophyte View MSA
123380235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain