Gene : Cagra.0635s0045 C. grandiflora v1.1
Defline:  (1 of 2) PTHR14150 - U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 Genomic Order:  45
Name:  ? Cagra.0635s0045 Secondary Identifier:  ? PAC:28908367
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0635s0045 0.5kb upstream 0.5kb upstream 4436 true Scaffold635: 167793-172228 Capsella grandiflora
Cagra.0635s0045 0.5kb upstream 0.5kb upstream 500 false Scaffold635: 171729-172228 Capsella grandiflora
Cagra.0635s0045 0.5kb downstream 0.5kb downstream 4436 true Scaffold635: 167293-171728 Capsella grandiflora
Cagra.0635s0045 0.5kb downstream 0.5kb downstream 500 false Scaffold635: 167293-167792 Capsella grandiflora
Cagra.0635s0045 1.0kb upstream 1.0kb upstream 4936 true Scaffold635: 167793-172728 Capsella grandiflora
Cagra.0635s0045 1.0kb upstream 1.0kb upstream 1000 false Scaffold635: 171729-172728 Capsella grandiflora
Cagra.0635s0045 1.0kb downstream 1.0kb downstream 4936 true Scaffold635: 166793-171728 Capsella grandiflora
Cagra.0635s0045 1.0kb downstream 1.0kb downstream 1000 false Scaffold635: 166793-167792 Capsella grandiflora
Cagra.0635s0045 2.0kb upstream 2.0kb upstream 5936 true Scaffold635: 167793-173728 Capsella grandiflora
Cagra.0635s0045 2.0kb upstream 2.0kb upstream 2000 false Scaffold635: 171729-173728 Capsella grandiflora
Cagra.0635s0045 2.0kb downstream 2.0kb downstream 5936 true Scaffold635: 165793-171728 Capsella grandiflora
Cagra.0635s0045 2.0kb downstream 2.0kb downstream 2000 false Scaffold635: 165793-167792 Capsella grandiflora
Cagra.0635s0045 5.0kb upstream 5.0kb upstream 8936 true Scaffold635: 167793-176728 Capsella grandiflora
Cagra.0635s0045 5.0kb upstream 5.0kb upstream 5000 false Scaffold635: 171729-176728 Capsella grandiflora
Cagra.0635s0045 5.0kb downstream 5.0kb downstream 8936 true Scaffold635: 162793-171728 Capsella grandiflora
Cagra.0635s0045 5.0kb downstream 5.0kb downstream 5000 false Scaffold635: 162793-167792 Capsella grandiflora
Cagra.0635s0045 10.0kb upstream 10.0kb upstream 13936 true Scaffold635: 167793-181728 Capsella grandiflora
Cagra.0635s0045 10.0kb upstream 10.0kb upstream 10000 false Scaffold635: 171729-181728 Capsella grandiflora
Cagra.0635s0045 10.0kb downstream 10.0kb downstream 13936 true Scaffold635: 157793-171728 Capsella grandiflora
Cagra.0635s0045 10.0kb downstream 10.0kb downstream 10000 false Scaffold635: 157793-167792 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371546 5261 Brassicaceae View MSA
123833119 5264 Brassicales-Malvales View MSA
124337304 5266 SBM View MSA
124241342 5268 Malvidae View MSA
124066027 5270 Rosid View MSA
123741569 5271 Pentapetalae View MSA
122789382 5272 Eudicot View MSA
122043501 5273 Angiosperm View MSA
121349819 5274 Embryophyte View MSA
123425174 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain