Gene : Cagra.0645s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12203//PTHR12203:SF32 - KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED Genomic Order:  1
Name:  ? Cagra.0645s0001 Secondary Identifier:  ? PAC:28896922
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0645s0001 0.5kb upstream 0.5kb upstream 3199 true Scaffold645: 1-3199 Capsella grandiflora
Cagra.0645s0001 0.5kb upstream 0.5kb upstream 187 false Scaffold645: 1-187 Capsella grandiflora
Cagra.0645s0001 0.5kb downstream 0.5kb downstream 3512 true Scaffold645: 188-3699 Capsella grandiflora
Cagra.0645s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold645: 3200-3699 Capsella grandiflora
Cagra.0645s0001 1.0kb upstream 1.0kb upstream 3199 true Scaffold645: 1-3199 Capsella grandiflora
Cagra.0645s0001 1.0kb upstream 1.0kb upstream 187 false Scaffold645: 1-187 Capsella grandiflora
Cagra.0645s0001 1.0kb downstream 1.0kb downstream 4012 true Scaffold645: 188-4199 Capsella grandiflora
Cagra.0645s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold645: 3200-4199 Capsella grandiflora
Cagra.0645s0001 2.0kb upstream 2.0kb upstream 3199 true Scaffold645: 1-3199 Capsella grandiflora
Cagra.0645s0001 2.0kb upstream 2.0kb upstream 187 false Scaffold645: 1-187 Capsella grandiflora
Cagra.0645s0001 2.0kb downstream 2.0kb downstream 5012 true Scaffold645: 188-5199 Capsella grandiflora
Cagra.0645s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold645: 3200-5199 Capsella grandiflora
Cagra.0645s0001 5.0kb upstream 5.0kb upstream 3199 true Scaffold645: 1-3199 Capsella grandiflora
Cagra.0645s0001 5.0kb upstream 5.0kb upstream 187 false Scaffold645: 1-187 Capsella grandiflora
Cagra.0645s0001 5.0kb downstream 5.0kb downstream 8012 true Scaffold645: 188-8199 Capsella grandiflora
Cagra.0645s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold645: 3200-8199 Capsella grandiflora
Cagra.0645s0001 10.0kb upstream 10.0kb upstream 3199 true Scaffold645: 1-3199 Capsella grandiflora
Cagra.0645s0001 10.0kb upstream 10.0kb upstream 187 false Scaffold645: 1-187 Capsella grandiflora
Cagra.0645s0001 10.0kb downstream 10.0kb downstream 13012 true Scaffold645: 188-13199 Capsella grandiflora
Cagra.0645s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold645: 3200-13199 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367222 5261 Brassicaceae View MSA
123837901 5264 Brassicales-Malvales View MSA
124340212 5266 SBM View MSA
124249956 5268 Malvidae View MSA
124071694 5270 Rosid View MSA
123749767 5271 Pentapetalae View MSA
122786856 5272 Eudicot View MSA
122044328 5273 Angiosperm View MSA
121310279 5274 Embryophyte View MSA
123428833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain