Gene : Cagra.0612s0081 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21726:SF49 - PHOSPHATIDYLINOSITOL N-ACETYGLUCOSAMINLYTRANSFERASE SUBUNIT P-LIKE PROTEIN Genomic Order:  81
Name:  ? Cagra.0612s0081 Secondary Identifier:  ? PAC:28917531
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0081 0.5kb upstream 0.5kb upstream 3170 true Scaffold612: 286626-289795 Capsella grandiflora
Cagra.0612s0081 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 289296-289795 Capsella grandiflora
Cagra.0612s0081 0.5kb downstream 0.5kb downstream 3170 true Scaffold612: 286126-289295 Capsella grandiflora
Cagra.0612s0081 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 286126-286625 Capsella grandiflora
Cagra.0612s0081 1.0kb upstream 1.0kb upstream 3670 true Scaffold612: 286626-290295 Capsella grandiflora
Cagra.0612s0081 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 289296-290295 Capsella grandiflora
Cagra.0612s0081 1.0kb downstream 1.0kb downstream 3670 true Scaffold612: 285626-289295 Capsella grandiflora
Cagra.0612s0081 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 285626-286625 Capsella grandiflora
Cagra.0612s0081 2.0kb upstream 2.0kb upstream 4670 true Scaffold612: 286626-291295 Capsella grandiflora
Cagra.0612s0081 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 289296-291295 Capsella grandiflora
Cagra.0612s0081 2.0kb downstream 2.0kb downstream 4670 true Scaffold612: 284626-289295 Capsella grandiflora
Cagra.0612s0081 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 284626-286625 Capsella grandiflora
Cagra.0612s0081 5.0kb upstream 5.0kb upstream 7670 true Scaffold612: 286626-294295 Capsella grandiflora
Cagra.0612s0081 5.0kb upstream 5.0kb upstream 5000 false Scaffold612: 289296-294295 Capsella grandiflora
Cagra.0612s0081 5.0kb downstream 5.0kb downstream 7670 true Scaffold612: 281626-289295 Capsella grandiflora
Cagra.0612s0081 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 281626-286625 Capsella grandiflora
Cagra.0612s0081 10.0kb upstream 10.0kb upstream 12670 true Scaffold612: 286626-299295 Capsella grandiflora
Cagra.0612s0081 10.0kb upstream 10.0kb upstream 10000 false Scaffold612: 289296-299295 Capsella grandiflora
Cagra.0612s0081 10.0kb downstream 10.0kb downstream 12670 true Scaffold612: 276626-289295 Capsella grandiflora
Cagra.0612s0081 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 276626-286625 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334077 5261 Brassicaceae Singleton cluster - no MSA
123774956 5264 Brassicales-Malvales Singleton cluster - no MSA
124273375 5266 SBM Singleton cluster - no MSA
124251546 5268 Malvidae View MSA
124070325 5270 Rosid View MSA
123752658 5271 Pentapetalae View MSA
122796149 5272 Eudicot View MSA
122047925 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain