Gene : Cagra.0612s0092 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24098:SF12 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  92
Name:  ? Cagra.0612s0092 Secondary Identifier:  ? PAC:28917561
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0092 0.5kb upstream 0.5kb upstream 5774 true Scaffold612: 328933-334706 Capsella grandiflora
Cagra.0612s0092 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 334207-334706 Capsella grandiflora
Cagra.0612s0092 0.5kb downstream 0.5kb downstream 5774 true Scaffold612: 328433-334206 Capsella grandiflora
Cagra.0612s0092 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 328433-328932 Capsella grandiflora
Cagra.0612s0092 1.0kb upstream 1.0kb upstream 6274 true Scaffold612: 328933-335206 Capsella grandiflora
Cagra.0612s0092 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 334207-335206 Capsella grandiflora
Cagra.0612s0092 1.0kb downstream 1.0kb downstream 6274 true Scaffold612: 327933-334206 Capsella grandiflora
Cagra.0612s0092 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 327933-328932 Capsella grandiflora
Cagra.0612s0092 2.0kb upstream 2.0kb upstream 7274 true Scaffold612: 328933-336206 Capsella grandiflora
Cagra.0612s0092 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 334207-336206 Capsella grandiflora
Cagra.0612s0092 2.0kb downstream 2.0kb downstream 7274 true Scaffold612: 326933-334206 Capsella grandiflora
Cagra.0612s0092 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 326933-328932 Capsella grandiflora
Cagra.0612s0092 5.0kb upstream 5.0kb upstream 10274 true Scaffold612: 328933-339206 Capsella grandiflora
Cagra.0612s0092 5.0kb upstream 5.0kb upstream 5000 false Scaffold612: 334207-339206 Capsella grandiflora
Cagra.0612s0092 5.0kb downstream 5.0kb downstream 10274 true Scaffold612: 323933-334206 Capsella grandiflora
Cagra.0612s0092 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 323933-328932 Capsella grandiflora
Cagra.0612s0092 10.0kb upstream 10.0kb upstream 15274 true Scaffold612: 328933-344206 Capsella grandiflora
Cagra.0612s0092 10.0kb upstream 10.0kb upstream 10000 false Scaffold612: 334207-344206 Capsella grandiflora
Cagra.0612s0092 10.0kb downstream 10.0kb downstream 15274 true Scaffold612: 318933-334206 Capsella grandiflora
Cagra.0612s0092 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 318933-328932 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377305 5261 Brassicaceae View MSA
123801497 5264 Brassicales-Malvales View MSA
124298794 5266 SBM View MSA
124243929 5268 Malvidae View MSA
124067394 5270 Rosid View MSA
123737655 5271 Pentapetalae View MSA
122795186 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain