Gene : Cagra.0613s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR20922:SF17 - F24J5.3 Genomic Order:  7
Name:  ? Cagra.0613s0007 Secondary Identifier:  ? PAC:28915371
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0613s0007 0.5kb upstream 0.5kb upstream 1539 true Scaffold613: 35982-37520 Capsella grandiflora
Cagra.0613s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold613: 35982-36481 Capsella grandiflora
Cagra.0613s0007 0.5kb downstream 0.5kb downstream 1539 true Scaffold613: 36482-38020 Capsella grandiflora
Cagra.0613s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold613: 37521-38020 Capsella grandiflora
Cagra.0613s0007 1.0kb upstream 1.0kb upstream 2039 true Scaffold613: 35482-37520 Capsella grandiflora
Cagra.0613s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold613: 35482-36481 Capsella grandiflora
Cagra.0613s0007 1.0kb downstream 1.0kb downstream 2039 true Scaffold613: 36482-38520 Capsella grandiflora
Cagra.0613s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold613: 37521-38520 Capsella grandiflora
Cagra.0613s0007 2.0kb upstream 2.0kb upstream 3039 true Scaffold613: 34482-37520 Capsella grandiflora
Cagra.0613s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold613: 34482-36481 Capsella grandiflora
Cagra.0613s0007 2.0kb downstream 2.0kb downstream 3039 true Scaffold613: 36482-39520 Capsella grandiflora
Cagra.0613s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold613: 37521-39520 Capsella grandiflora
Cagra.0613s0007 5.0kb upstream 5.0kb upstream 6039 true Scaffold613: 31482-37520 Capsella grandiflora
Cagra.0613s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold613: 31482-36481 Capsella grandiflora
Cagra.0613s0007 5.0kb downstream 5.0kb downstream 6039 true Scaffold613: 36482-42520 Capsella grandiflora
Cagra.0613s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold613: 37521-42520 Capsella grandiflora
Cagra.0613s0007 10.0kb upstream 10.0kb upstream 11039 true Scaffold613: 26482-37520 Capsella grandiflora
Cagra.0613s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold613: 26482-36481 Capsella grandiflora
Cagra.0613s0007 10.0kb downstream 10.0kb downstream 11039 true Scaffold613: 36482-47520 Capsella grandiflora
Cagra.0613s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold613: 37521-47520 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375514 5261 Brassicaceae View MSA
123832584 5264 Brassicales-Malvales View MSA
124346643 5266 SBM View MSA
124238453 5268 Malvidae View MSA
124068181 5270 Rosid View MSA
123747456 5271 Pentapetalae View MSA
122796355 5272 Eudicot View MSA
122048491 5273 Angiosperm View MSA
121349693 5274 Embryophyte View MSA
123425918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain