Gene : Cagra.0608s0001 C. grandiflora v1.1
Defline:  (1 of 3) KOG3083 - Prohibitin Genomic Order:  1
Name:  ? Cagra.0608s0001 Secondary Identifier:  ? PAC:28894754
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0608s0001 0.5kb upstream 0.5kb upstream 2071 true Scaffold608: 2433-4503 Capsella grandiflora
Cagra.0608s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold608: 2433-2932 Capsella grandiflora
Cagra.0608s0001 0.5kb downstream 0.5kb downstream 2071 true Scaffold608: 2933-5003 Capsella grandiflora
Cagra.0608s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold608: 4504-5003 Capsella grandiflora
Cagra.0608s0001 1.0kb upstream 1.0kb upstream 2571 true Scaffold608: 1933-4503 Capsella grandiflora
Cagra.0608s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold608: 1933-2932 Capsella grandiflora
Cagra.0608s0001 1.0kb downstream 1.0kb downstream 2571 true Scaffold608: 2933-5503 Capsella grandiflora
Cagra.0608s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold608: 4504-5503 Capsella grandiflora
Cagra.0608s0001 2.0kb upstream 2.0kb upstream 3571 true Scaffold608: 933-4503 Capsella grandiflora
Cagra.0608s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold608: 933-2932 Capsella grandiflora
Cagra.0608s0001 2.0kb downstream 2.0kb downstream 3571 true Scaffold608: 2933-6503 Capsella grandiflora
Cagra.0608s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold608: 4504-6503 Capsella grandiflora
Cagra.0608s0001 5.0kb upstream 5.0kb upstream 4503 true Scaffold608: 1-4503 Capsella grandiflora
Cagra.0608s0001 5.0kb upstream 5.0kb upstream 2932 false Scaffold608: 1-2932 Capsella grandiflora
Cagra.0608s0001 5.0kb downstream 5.0kb downstream 6571 true Scaffold608: 2933-9503 Capsella grandiflora
Cagra.0608s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold608: 4504-9503 Capsella grandiflora
Cagra.0608s0001 10.0kb upstream 10.0kb upstream 4503 true Scaffold608: 1-4503 Capsella grandiflora
Cagra.0608s0001 10.0kb upstream 10.0kb upstream 2932 false Scaffold608: 1-2932 Capsella grandiflora
Cagra.0608s0001 10.0kb downstream 10.0kb downstream 11571 true Scaffold608: 2933-14503 Capsella grandiflora
Cagra.0608s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold608: 4504-14503 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374485 5261 Brassicaceae View MSA
123835592 5264 Brassicales-Malvales View MSA
124342851 5266 SBM View MSA
124241063 5268 Malvidae View MSA
124063622 5270 Rosid View MSA
123737783 5271 Pentapetalae View MSA
122796459 5272 Eudicot View MSA
122046711 5273 Angiosperm View MSA
121346125 5274 Embryophyte View MSA
123427118 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain