Gene : Cagra.0608s0005 C. grandiflora v1.1
Defline:  (1 of 4) PTHR31358:SF6 - F3I6.9 PROTEIN Genomic Order:  5
Name:  ? Cagra.0608s0005 Secondary Identifier:  ? PAC:28894761
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0608s0005 0.5kb upstream 0.5kb upstream 2469 true Scaffold608: 26458-28926 Capsella grandiflora
Cagra.0608s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold608: 26458-26957 Capsella grandiflora
Cagra.0608s0005 0.5kb downstream 0.5kb downstream 2469 true Scaffold608: 26958-29426 Capsella grandiflora
Cagra.0608s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold608: 28927-29426 Capsella grandiflora
Cagra.0608s0005 1.0kb upstream 1.0kb upstream 2969 true Scaffold608: 25958-28926 Capsella grandiflora
Cagra.0608s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold608: 25958-26957 Capsella grandiflora
Cagra.0608s0005 1.0kb downstream 1.0kb downstream 2969 true Scaffold608: 26958-29926 Capsella grandiflora
Cagra.0608s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold608: 28927-29926 Capsella grandiflora
Cagra.0608s0005 2.0kb upstream 2.0kb upstream 3969 true Scaffold608: 24958-28926 Capsella grandiflora
Cagra.0608s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold608: 24958-26957 Capsella grandiflora
Cagra.0608s0005 2.0kb downstream 2.0kb downstream 3969 true Scaffold608: 26958-30926 Capsella grandiflora
Cagra.0608s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold608: 28927-30926 Capsella grandiflora
Cagra.0608s0005 5.0kb upstream 5.0kb upstream 6969 true Scaffold608: 21958-28926 Capsella grandiflora
Cagra.0608s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold608: 21958-26957 Capsella grandiflora
Cagra.0608s0005 5.0kb downstream 5.0kb downstream 6969 true Scaffold608: 26958-33926 Capsella grandiflora
Cagra.0608s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold608: 28927-33926 Capsella grandiflora
Cagra.0608s0005 10.0kb upstream 10.0kb upstream 11969 true Scaffold608: 16958-28926 Capsella grandiflora
Cagra.0608s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold608: 16958-26957 Capsella grandiflora
Cagra.0608s0005 10.0kb downstream 10.0kb downstream 11969 true Scaffold608: 26958-38926 Capsella grandiflora
Cagra.0608s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold608: 28927-38926 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363218 5261 Brassicaceae View MSA
123798501 5264 Brassicales-Malvales View MSA
124296128 5266 SBM View MSA
124243729 5268 Malvidae View MSA
124072865 5270 Rosid View MSA
123746894 5271 Pentapetalae View MSA
122791209 5272 Eudicot View MSA
122048552 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain