Gene : Cagra.0609s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR27001:SF75 - PROTEIN KINASE FAMILY PROTEIN Genomic Order:  3
Name:  ? Cagra.0609s0003 Secondary Identifier:  ? PAC:28901360
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0609s0003 0.5kb upstream 0.5kb upstream 3138 true Scaffold609: 7556-10693 Capsella grandiflora
Cagra.0609s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold609: 7556-8055 Capsella grandiflora
Cagra.0609s0003 0.5kb downstream 0.5kb downstream 3138 true Scaffold609: 8056-11193 Capsella grandiflora
Cagra.0609s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold609: 10694-11193 Capsella grandiflora
Cagra.0609s0003 1.0kb upstream 1.0kb upstream 3638 true Scaffold609: 7056-10693 Capsella grandiflora
Cagra.0609s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold609: 7056-8055 Capsella grandiflora
Cagra.0609s0003 1.0kb downstream 1.0kb downstream 3638 true Scaffold609: 8056-11693 Capsella grandiflora
Cagra.0609s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold609: 10694-11693 Capsella grandiflora
Cagra.0609s0003 2.0kb upstream 2.0kb upstream 4638 true Scaffold609: 6056-10693 Capsella grandiflora
Cagra.0609s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold609: 6056-8055 Capsella grandiflora
Cagra.0609s0003 2.0kb downstream 2.0kb downstream 4638 true Scaffold609: 8056-12693 Capsella grandiflora
Cagra.0609s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold609: 10694-12693 Capsella grandiflora
Cagra.0609s0003 5.0kb upstream 5.0kb upstream 7638 true Scaffold609: 3056-10693 Capsella grandiflora
Cagra.0609s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold609: 3056-8055 Capsella grandiflora
Cagra.0609s0003 5.0kb downstream 5.0kb downstream 7638 true Scaffold609: 8056-15693 Capsella grandiflora
Cagra.0609s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold609: 10694-15693 Capsella grandiflora
Cagra.0609s0003 10.0kb upstream 10.0kb upstream 10693 true Scaffold609: 1-10693 Capsella grandiflora
Cagra.0609s0003 10.0kb upstream 10.0kb upstream 8055 false Scaffold609: 1-8055 Capsella grandiflora
Cagra.0609s0003 10.0kb downstream 10.0kb downstream 12638 true Scaffold609: 8056-20693 Capsella grandiflora
Cagra.0609s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold609: 10694-20693 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028314 5273 Angiosperm View MSA
122368146 5261 Brassicaceae View MSA
123838178 5264 Brassicales-Malvales View MSA
124342140 5266 SBM View MSA
124249542 5268 Malvidae View MSA
124063419 5270 Rosid View MSA
123742155 5271 Pentapetalae View MSA
122794500 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121350468 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain