Gene : Cagra.0608s0010 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11921:SF29 - SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIAL Genomic Order:  10
Name:  ? Cagra.0608s0010 Secondary Identifier:  ? PAC:28894758
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3781 Capsella grandiflora pathologic  
Cgrandiflora PWY-4302 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PWY-561 Capsella grandiflora pathologic  
Cgrandiflora PWY-5690 Capsella grandiflora pathologic  
Cgrandiflora PWY-7279 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0608s0010 0.5kb upstream 0.5kb upstream 2432 true Scaffold608: 41299-43730 Capsella grandiflora
Cagra.0608s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold608: 43231-43730 Capsella grandiflora
Cagra.0608s0010 0.5kb downstream 0.5kb downstream 2432 true Scaffold608: 40799-43230 Capsella grandiflora
Cagra.0608s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold608: 40799-41298 Capsella grandiflora
Cagra.0608s0010 1.0kb upstream 1.0kb upstream 2932 true Scaffold608: 41299-44230 Capsella grandiflora
Cagra.0608s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold608: 43231-44230 Capsella grandiflora
Cagra.0608s0010 1.0kb downstream 1.0kb downstream 2932 true Scaffold608: 40299-43230 Capsella grandiflora
Cagra.0608s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold608: 40299-41298 Capsella grandiflora
Cagra.0608s0010 2.0kb upstream 2.0kb upstream 3932 true Scaffold608: 41299-45230 Capsella grandiflora
Cagra.0608s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold608: 43231-45230 Capsella grandiflora
Cagra.0608s0010 2.0kb downstream 2.0kb downstream 3932 true Scaffold608: 39299-43230 Capsella grandiflora
Cagra.0608s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold608: 39299-41298 Capsella grandiflora
Cagra.0608s0010 5.0kb upstream 5.0kb upstream 6932 true Scaffold608: 41299-48230 Capsella grandiflora
Cagra.0608s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold608: 43231-48230 Capsella grandiflora
Cagra.0608s0010 5.0kb downstream 5.0kb downstream 6932 true Scaffold608: 36299-43230 Capsella grandiflora
Cagra.0608s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold608: 36299-41298 Capsella grandiflora
Cagra.0608s0010 10.0kb upstream 10.0kb upstream 11932 true Scaffold608: 41299-53230 Capsella grandiflora
Cagra.0608s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold608: 43231-53230 Capsella grandiflora
Cagra.0608s0010 10.0kb downstream 10.0kb downstream 11932 true Scaffold608: 31299-43230 Capsella grandiflora
Cagra.0608s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold608: 31299-41298 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377104 5261 Brassicaceae View MSA
123827832 5264 Brassicales-Malvales View MSA
124342277 5266 SBM View MSA
124240423 5268 Malvidae View MSA
124072619 5270 Rosid View MSA
123748072 5271 Pentapetalae View MSA
122787884 5272 Eudicot View MSA
122049105 5273 Angiosperm View MSA
121351479 5274 Embryophyte View MSA
123424532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain