Gene : Cagra.0612s0001 C. grandiflora v1.1
Defline:  (1 of 9) PTHR10634 - AN1-TYPE ZINC FINGER PROTEIN Genomic Order:  1
Name:  ? Cagra.0612s0001 Secondary Identifier:  ? PAC:28917577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0001 0.5kb upstream 0.5kb upstream 1721 true Scaffold612: 1-1721 Capsella grandiflora
Cagra.0612s0001 0.5kb upstream 0.5kb upstream 414 false Scaffold612: 1-414 Capsella grandiflora
Cagra.0612s0001 0.5kb downstream 0.5kb downstream 1807 true Scaffold612: 415-2221 Capsella grandiflora
Cagra.0612s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 1722-2221 Capsella grandiflora
Cagra.0612s0001 1.0kb upstream 1.0kb upstream 1721 true Scaffold612: 1-1721 Capsella grandiflora
Cagra.0612s0001 1.0kb upstream 1.0kb upstream 414 false Scaffold612: 1-414 Capsella grandiflora
Cagra.0612s0001 1.0kb downstream 1.0kb downstream 2307 true Scaffold612: 415-2721 Capsella grandiflora
Cagra.0612s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 1722-2721 Capsella grandiflora
Cagra.0612s0001 2.0kb upstream 2.0kb upstream 1721 true Scaffold612: 1-1721 Capsella grandiflora
Cagra.0612s0001 2.0kb upstream 2.0kb upstream 414 false Scaffold612: 1-414 Capsella grandiflora
Cagra.0612s0001 2.0kb downstream 2.0kb downstream 3307 true Scaffold612: 415-3721 Capsella grandiflora
Cagra.0612s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 1722-3721 Capsella grandiflora
Cagra.0612s0001 5.0kb upstream 5.0kb upstream 1721 true Scaffold612: 1-1721 Capsella grandiflora
Cagra.0612s0001 5.0kb upstream 5.0kb upstream 414 false Scaffold612: 1-414 Capsella grandiflora
Cagra.0612s0001 5.0kb downstream 5.0kb downstream 6307 true Scaffold612: 415-6721 Capsella grandiflora
Cagra.0612s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 1722-6721 Capsella grandiflora
Cagra.0612s0001 10.0kb upstream 10.0kb upstream 1721 true Scaffold612: 1-1721 Capsella grandiflora
Cagra.0612s0001 10.0kb upstream 10.0kb upstream 414 false Scaffold612: 1-414 Capsella grandiflora
Cagra.0612s0001 10.0kb downstream 10.0kb downstream 11307 true Scaffold612: 415-11721 Capsella grandiflora
Cagra.0612s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 1722-11721 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379987 5261 Brassicaceae View MSA
123839533 5264 Brassicales-Malvales View MSA
124343588 5266 SBM View MSA
124251529 5268 Malvidae View MSA
124064566 5270 Rosid View MSA
123746917 5271 Pentapetalae View MSA
122796829 5272 Eudicot View MSA
122050732 5273 Angiosperm View MSA
121349866 5274 Embryophyte View MSA
123428230 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain