Gene : Cagra.0608s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21013 - ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR Genomic Order:  9
Name:  ? Cagra.0608s0009 Secondary Identifier:  ? PAC:28894752
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0608s0009 0.5kb upstream 0.5kb upstream 3274 true Scaffold608: 38456-41729 Capsella grandiflora
Cagra.0608s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold608: 38456-38955 Capsella grandiflora
Cagra.0608s0009 0.5kb downstream 0.5kb downstream 3274 true Scaffold608: 38956-42229 Capsella grandiflora
Cagra.0608s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold608: 41730-42229 Capsella grandiflora
Cagra.0608s0009 1.0kb upstream 1.0kb upstream 3774 true Scaffold608: 37956-41729 Capsella grandiflora
Cagra.0608s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold608: 37956-38955 Capsella grandiflora
Cagra.0608s0009 1.0kb downstream 1.0kb downstream 3774 true Scaffold608: 38956-42729 Capsella grandiflora
Cagra.0608s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold608: 41730-42729 Capsella grandiflora
Cagra.0608s0009 2.0kb upstream 2.0kb upstream 4774 true Scaffold608: 36956-41729 Capsella grandiflora
Cagra.0608s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold608: 36956-38955 Capsella grandiflora
Cagra.0608s0009 2.0kb downstream 2.0kb downstream 4774 true Scaffold608: 38956-43729 Capsella grandiflora
Cagra.0608s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold608: 41730-43729 Capsella grandiflora
Cagra.0608s0009 5.0kb upstream 5.0kb upstream 7774 true Scaffold608: 33956-41729 Capsella grandiflora
Cagra.0608s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold608: 33956-38955 Capsella grandiflora
Cagra.0608s0009 5.0kb downstream 5.0kb downstream 7774 true Scaffold608: 38956-46729 Capsella grandiflora
Cagra.0608s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold608: 41730-46729 Capsella grandiflora
Cagra.0608s0009 10.0kb upstream 10.0kb upstream 12774 true Scaffold608: 28956-41729 Capsella grandiflora
Cagra.0608s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold608: 28956-38955 Capsella grandiflora
Cagra.0608s0009 10.0kb downstream 10.0kb downstream 12774 true Scaffold608: 38956-51729 Capsella grandiflora
Cagra.0608s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold608: 41730-51729 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368997 5261 Brassicaceae View MSA
123830317 5264 Brassicales-Malvales View MSA
124341575 5266 SBM View MSA
124240550 5268 Malvidae View MSA
124066318 5270 Rosid View MSA
123746720 5271 Pentapetalae View MSA
122791675 5272 Eudicot View MSA
122045593 5273 Angiosperm View MSA
121344547 5274 Embryophyte View MSA
123428622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain