Gene : Cagra.0612s0003 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23421:SF74 - BETA-GALACTOSIDASE 1 Genomic Order:  3
Name:  ? Cagra.0612s0003 Secondary Identifier:  ? PAC:28917610
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0003 0.5kb upstream 0.5kb upstream 5896 true Scaffold612: 10299-16194 Capsella grandiflora
Cagra.0612s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 10299-10798 Capsella grandiflora
Cagra.0612s0003 0.5kb downstream 0.5kb downstream 5896 true Scaffold612: 10799-16694 Capsella grandiflora
Cagra.0612s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 16195-16694 Capsella grandiflora
Cagra.0612s0003 1.0kb upstream 1.0kb upstream 6396 true Scaffold612: 9799-16194 Capsella grandiflora
Cagra.0612s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 9799-10798 Capsella grandiflora
Cagra.0612s0003 1.0kb downstream 1.0kb downstream 6396 true Scaffold612: 10799-17194 Capsella grandiflora
Cagra.0612s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 16195-17194 Capsella grandiflora
Cagra.0612s0003 2.0kb upstream 2.0kb upstream 7396 true Scaffold612: 8799-16194 Capsella grandiflora
Cagra.0612s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 8799-10798 Capsella grandiflora
Cagra.0612s0003 2.0kb downstream 2.0kb downstream 7396 true Scaffold612: 10799-18194 Capsella grandiflora
Cagra.0612s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 16195-18194 Capsella grandiflora
Cagra.0612s0003 5.0kb upstream 5.0kb upstream 10396 true Scaffold612: 5799-16194 Capsella grandiflora
Cagra.0612s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold612: 5799-10798 Capsella grandiflora
Cagra.0612s0003 5.0kb downstream 5.0kb downstream 10396 true Scaffold612: 10799-21194 Capsella grandiflora
Cagra.0612s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 16195-21194 Capsella grandiflora
Cagra.0612s0003 10.0kb upstream 10.0kb upstream 15396 true Scaffold612: 799-16194 Capsella grandiflora
Cagra.0612s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold612: 799-10798 Capsella grandiflora
Cagra.0612s0003 10.0kb downstream 10.0kb downstream 15396 true Scaffold612: 10799-26194 Capsella grandiflora
Cagra.0612s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 16195-26194 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378148 5261 Brassicaceae View MSA
123801759 5264 Brassicales-Malvales View MSA
124299028 5266 SBM View MSA
124150544 5268 Malvidae View MSA
123876140 5270 Rosid View MSA
123743472 5271 Pentapetalae View MSA
122770672 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain