Gene : Cagra.0612s0013 C. grandiflora v1.1
Defline:  (1 of 8) 4.1.2.13 - Fructose-bisphosphate aldolase / Fructose-1,6-bisphosphate triosephosphate-lyase Genomic Order:  13
Name:  ? Cagra.0612s0013 Secondary Identifier:  ? PAC:28917567
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Sequence Feature Displayer

Ontology Annotation Displayer

10 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ANAEROFRUCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora ANAGLYCOLYSIS-PWY Capsella grandiflora pathologic  
Cgrandiflora CALVIN-PWY Capsella grandiflora pathologic  
Cgrandiflora GLUCONEO-PWY Capsella grandiflora pathologic  
Cgrandiflora PHOTOALL-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-1042 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PWY66-373 Capsella grandiflora pathologic  
Cgrandiflora PWY66-399 Capsella grandiflora pathologic  
Cgrandiflora SUCSYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0013 0.5kb upstream 0.5kb upstream 2370 true Scaffold612: 57617-59986 Capsella grandiflora
Cagra.0612s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 59487-59986 Capsella grandiflora
Cagra.0612s0013 0.5kb downstream 0.5kb downstream 2370 true Scaffold612: 57117-59486 Capsella grandiflora
Cagra.0612s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 57117-57616 Capsella grandiflora
Cagra.0612s0013 1.0kb upstream 1.0kb upstream 2870 true Scaffold612: 57617-60486 Capsella grandiflora
Cagra.0612s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 59487-60486 Capsella grandiflora
Cagra.0612s0013 1.0kb downstream 1.0kb downstream 2870 true Scaffold612: 56617-59486 Capsella grandiflora
Cagra.0612s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 56617-57616 Capsella grandiflora
Cagra.0612s0013 2.0kb upstream 2.0kb upstream 3870 true Scaffold612: 57617-61486 Capsella grandiflora
Cagra.0612s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 59487-61486 Capsella grandiflora
Cagra.0612s0013 2.0kb downstream 2.0kb downstream 3870 true Scaffold612: 55617-59486 Capsella grandiflora
Cagra.0612s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 55617-57616 Capsella grandiflora
Cagra.0612s0013 5.0kb upstream 5.0kb upstream 6870 true Scaffold612: 57617-64486 Capsella grandiflora
Cagra.0612s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold612: 59487-64486 Capsella grandiflora
Cagra.0612s0013 5.0kb downstream 5.0kb downstream 6870 true Scaffold612: 52617-59486 Capsella grandiflora
Cagra.0612s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 52617-57616 Capsella grandiflora
Cagra.0612s0013 10.0kb upstream 10.0kb upstream 11870 true Scaffold612: 57617-69486 Capsella grandiflora
Cagra.0612s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold612: 59487-69486 Capsella grandiflora
Cagra.0612s0013 10.0kb downstream 10.0kb downstream 11870 true Scaffold612: 47617-59486 Capsella grandiflora
Cagra.0612s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 47617-57616 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378662 5261 Brassicaceae View MSA
123836011 5264 Brassicales-Malvales View MSA
124341755 5266 SBM View MSA
124249698 5268 Malvidae View MSA
124060719 5270 Rosid View MSA
123751552 5271 Pentapetalae View MSA
122795732 5272 Eudicot View MSA
122046933 5273 Angiosperm View MSA
121346548 5274 Embryophyte View MSA
123428415 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain