Gene : Cagra.0612s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11902//PTHR11902:SF19 - ENOLASE Genomic Order:  16
Name:  ? Cagra.0612s0016 Secondary Identifier:  ? PAC:28917559
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ANAEROFRUCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora ANAGLYCOLYSIS-PWY Capsella grandiflora pathologic  
Cgrandiflora GLUCONEO-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-1042 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PWY-5723 Capsella grandiflora pathologic  
Cgrandiflora PWY66-399 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0016 0.5kb upstream 0.5kb upstream 3502 true Scaffold612: 68082-71583 Capsella grandiflora
Cagra.0612s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 71084-71583 Capsella grandiflora
Cagra.0612s0016 0.5kb downstream 0.5kb downstream 3502 true Scaffold612: 67582-71083 Capsella grandiflora
Cagra.0612s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 67582-68081 Capsella grandiflora
Cagra.0612s0016 1.0kb upstream 1.0kb upstream 4002 true Scaffold612: 68082-72083 Capsella grandiflora
Cagra.0612s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 71084-72083 Capsella grandiflora
Cagra.0612s0016 1.0kb downstream 1.0kb downstream 4002 true Scaffold612: 67082-71083 Capsella grandiflora
Cagra.0612s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 67082-68081 Capsella grandiflora
Cagra.0612s0016 2.0kb upstream 2.0kb upstream 5002 true Scaffold612: 68082-73083 Capsella grandiflora
Cagra.0612s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 71084-73083 Capsella grandiflora
Cagra.0612s0016 2.0kb downstream 2.0kb downstream 5002 true Scaffold612: 66082-71083 Capsella grandiflora
Cagra.0612s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 66082-68081 Capsella grandiflora
Cagra.0612s0016 5.0kb upstream 5.0kb upstream 8002 true Scaffold612: 68082-76083 Capsella grandiflora
Cagra.0612s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold612: 71084-76083 Capsella grandiflora
Cagra.0612s0016 5.0kb downstream 5.0kb downstream 8002 true Scaffold612: 63082-71083 Capsella grandiflora
Cagra.0612s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 63082-68081 Capsella grandiflora
Cagra.0612s0016 10.0kb upstream 10.0kb upstream 13002 true Scaffold612: 68082-81083 Capsella grandiflora
Cagra.0612s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold612: 71084-81083 Capsella grandiflora
Cagra.0612s0016 10.0kb downstream 10.0kb downstream 13002 true Scaffold612: 58082-71083 Capsella grandiflora
Cagra.0612s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 58082-68081 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122795739 5272 Eudicot View MSA
122380936 5261 Brassicaceae View MSA
123830581 5264 Brassicales-Malvales View MSA
124342591 5266 SBM View MSA
124246138 5268 Malvidae View MSA
124069637 5270 Rosid View MSA
123747051 5271 Pentapetalae View MSA
122041706 5273 Angiosperm View MSA
121345038 5274 Embryophyte View MSA
123427139 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain