Gene : Cagra.0612s0062 C. grandiflora v1.1
Defline:  (1 of 3) PF04689 - DNA binding protein S1FA (S1FA) Genomic Order:  62
Name:  ? Cagra.0612s0062 Secondary Identifier:  ? PAC:28917612
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0062 0.5kb upstream 0.5kb upstream 1445 true Scaffold612: 220465-221909 Capsella grandiflora
Cagra.0612s0062 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 221410-221909 Capsella grandiflora
Cagra.0612s0062 0.5kb downstream 0.5kb downstream 1445 true Scaffold612: 219965-221409 Capsella grandiflora
Cagra.0612s0062 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 219965-220464 Capsella grandiflora
Cagra.0612s0062 1.0kb upstream 1.0kb upstream 1945 true Scaffold612: 220465-222409 Capsella grandiflora
Cagra.0612s0062 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 221410-222409 Capsella grandiflora
Cagra.0612s0062 1.0kb downstream 1.0kb downstream 1945 true Scaffold612: 219465-221409 Capsella grandiflora
Cagra.0612s0062 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 219465-220464 Capsella grandiflora
Cagra.0612s0062 2.0kb upstream 2.0kb upstream 2945 true Scaffold612: 220465-223409 Capsella grandiflora
Cagra.0612s0062 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 221410-223409 Capsella grandiflora
Cagra.0612s0062 2.0kb downstream 2.0kb downstream 2945 true Scaffold612: 218465-221409 Capsella grandiflora
Cagra.0612s0062 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 218465-220464 Capsella grandiflora
Cagra.0612s0062 5.0kb upstream 5.0kb upstream 5945 true Scaffold612: 220465-226409 Capsella grandiflora
Cagra.0612s0062 5.0kb upstream 5.0kb upstream 5000 false Scaffold612: 221410-226409 Capsella grandiflora
Cagra.0612s0062 5.0kb downstream 5.0kb downstream 5945 true Scaffold612: 215465-221409 Capsella grandiflora
Cagra.0612s0062 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 215465-220464 Capsella grandiflora
Cagra.0612s0062 10.0kb upstream 10.0kb upstream 10945 true Scaffold612: 220465-231409 Capsella grandiflora
Cagra.0612s0062 10.0kb upstream 10.0kb upstream 10000 false Scaffold612: 221410-231409 Capsella grandiflora
Cagra.0612s0062 10.0kb downstream 10.0kb downstream 10945 true Scaffold612: 210465-221409 Capsella grandiflora
Cagra.0612s0062 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 210465-220464 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367637 5261 Brassicaceae View MSA
123835903 5264 Brassicales-Malvales View MSA
124349743 5266 SBM View MSA
124251258 5268 Malvidae View MSA
124072981 5270 Rosid View MSA
123737757 5271 Pentapetalae View MSA
122787039 5272 Eudicot View MSA
122043521 5273 Angiosperm View MSA
121348101 5274 Embryophyte View MSA
123427366 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain