Gene : Cagra.0612s0068 C. grandiflora v1.1
Defline:  (1 of 3) PTHR19139:SF167 - AQUAPORIN PIP2-1-RELATED Genomic Order:  68
Name:  ? Cagra.0612s0068 Secondary Identifier:  ? PAC:28917537
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0068 0.5kb upstream 0.5kb upstream 2024 true Scaffold612: 238676-240699 Capsella grandiflora
Cagra.0612s0068 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 240200-240699 Capsella grandiflora
Cagra.0612s0068 0.5kb downstream 0.5kb downstream 2024 true Scaffold612: 238176-240199 Capsella grandiflora
Cagra.0612s0068 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 238176-238675 Capsella grandiflora
Cagra.0612s0068 1.0kb upstream 1.0kb upstream 2524 true Scaffold612: 238676-241199 Capsella grandiflora
Cagra.0612s0068 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 240200-241199 Capsella grandiflora
Cagra.0612s0068 1.0kb downstream 1.0kb downstream 2524 true Scaffold612: 237676-240199 Capsella grandiflora
Cagra.0612s0068 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 237676-238675 Capsella grandiflora
Cagra.0612s0068 2.0kb upstream 2.0kb upstream 3524 true Scaffold612: 238676-242199 Capsella grandiflora
Cagra.0612s0068 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 240200-242199 Capsella grandiflora
Cagra.0612s0068 2.0kb downstream 2.0kb downstream 3524 true Scaffold612: 236676-240199 Capsella grandiflora
Cagra.0612s0068 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 236676-238675 Capsella grandiflora
Cagra.0612s0068 5.0kb upstream 5.0kb upstream 6524 true Scaffold612: 238676-245199 Capsella grandiflora
Cagra.0612s0068 5.0kb upstream 5.0kb upstream 5000 false Scaffold612: 240200-245199 Capsella grandiflora
Cagra.0612s0068 5.0kb downstream 5.0kb downstream 6524 true Scaffold612: 233676-240199 Capsella grandiflora
Cagra.0612s0068 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 233676-238675 Capsella grandiflora
Cagra.0612s0068 10.0kb upstream 10.0kb upstream 11524 true Scaffold612: 238676-250199 Capsella grandiflora
Cagra.0612s0068 10.0kb upstream 10.0kb upstream 10000 false Scaffold612: 240200-250199 Capsella grandiflora
Cagra.0612s0068 10.0kb downstream 10.0kb downstream 11524 true Scaffold612: 228676-240199 Capsella grandiflora
Cagra.0612s0068 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 228676-238675 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334078 5261 Brassicaceae Singleton cluster - no MSA
123774957 5264 Brassicales-Malvales Singleton cluster - no MSA
124273376 5266 SBM Singleton cluster - no MSA
124255575 5268 Malvidae View MSA
124072512 5270 Rosid View MSA
123751650 5271 Pentapetalae View MSA
122791496 5272 Eudicot View MSA
122046313 5273 Angiosperm View MSA
121349621 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain