Gene : Cagra.0596s0061 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10108//PTHR10108:SF908 - METHYLTRANSFERASE Genomic Order:  61
Name:  ? Cagra.0596s0061 Secondary Identifier:  ? PAC:28920025
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-2541 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0596s0061 0.5kb upstream 0.5kb upstream 4181 true Scaffold596: 263475-267655 Capsella grandiflora
Cagra.0596s0061 0.5kb upstream 0.5kb upstream 500 false Scaffold596: 267156-267655 Capsella grandiflora
Cagra.0596s0061 0.5kb downstream 0.5kb downstream 4181 true Scaffold596: 262975-267155 Capsella grandiflora
Cagra.0596s0061 0.5kb downstream 0.5kb downstream 500 false Scaffold596: 262975-263474 Capsella grandiflora
Cagra.0596s0061 1.0kb upstream 1.0kb upstream 4681 true Scaffold596: 263475-268155 Capsella grandiflora
Cagra.0596s0061 1.0kb upstream 1.0kb upstream 1000 false Scaffold596: 267156-268155 Capsella grandiflora
Cagra.0596s0061 1.0kb downstream 1.0kb downstream 4681 true Scaffold596: 262475-267155 Capsella grandiflora
Cagra.0596s0061 1.0kb downstream 1.0kb downstream 1000 false Scaffold596: 262475-263474 Capsella grandiflora
Cagra.0596s0061 2.0kb upstream 2.0kb upstream 5681 true Scaffold596: 263475-269155 Capsella grandiflora
Cagra.0596s0061 2.0kb upstream 2.0kb upstream 2000 false Scaffold596: 267156-269155 Capsella grandiflora
Cagra.0596s0061 2.0kb downstream 2.0kb downstream 5681 true Scaffold596: 261475-267155 Capsella grandiflora
Cagra.0596s0061 2.0kb downstream 2.0kb downstream 2000 false Scaffold596: 261475-263474 Capsella grandiflora
Cagra.0596s0061 5.0kb upstream 5.0kb upstream 8372 true Scaffold596: 263475-271846 Capsella grandiflora
Cagra.0596s0061 5.0kb upstream 5.0kb upstream 4691 false Scaffold596: 267156-271846 Capsella grandiflora
Cagra.0596s0061 5.0kb downstream 5.0kb downstream 8681 true Scaffold596: 258475-267155 Capsella grandiflora
Cagra.0596s0061 5.0kb downstream 5.0kb downstream 5000 false Scaffold596: 258475-263474 Capsella grandiflora
Cagra.0596s0061 10.0kb upstream 10.0kb upstream 8372 true Scaffold596: 263475-271846 Capsella grandiflora
Cagra.0596s0061 10.0kb upstream 10.0kb upstream 4691 false Scaffold596: 267156-271846 Capsella grandiflora
Cagra.0596s0061 10.0kb downstream 10.0kb downstream 13681 true Scaffold596: 253475-267155 Capsella grandiflora
Cagra.0596s0061 10.0kb downstream 10.0kb downstream 10000 false Scaffold596: 253475-263474 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041479 5273 Angiosperm View MSA
122372640 5261 Brassicaceae View MSA
123827735 5264 Brassicales-Malvales View MSA
124350111 5266 SBM View MSA
124248608 5268 Malvidae View MSA
124073694 5270 Rosid View MSA
123743908 5271 Pentapetalae View MSA
122793455 5272 Eudicot View MSA
121345470 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain