Gene : Cagra.0596s0062 C. grandiflora v1.1
Defline:  (1 of 2) PF03350 - Uncharacterized protein family, UPF0114 (UPF0114) Genomic Order:  62
Name:  ? Cagra.0596s0062 Secondary Identifier:  ? PAC:28920049
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0596s0062 0.5kb upstream 0.5kb upstream 1824 true Scaffold596: 267236-269059 Capsella grandiflora
Cagra.0596s0062 0.5kb upstream 0.5kb upstream 500 false Scaffold596: 267236-267735 Capsella grandiflora
Cagra.0596s0062 0.5kb downstream 0.5kb downstream 1824 true Scaffold596: 267736-269559 Capsella grandiflora
Cagra.0596s0062 0.5kb downstream 0.5kb downstream 500 false Scaffold596: 269060-269559 Capsella grandiflora
Cagra.0596s0062 1.0kb upstream 1.0kb upstream 2324 true Scaffold596: 266736-269059 Capsella grandiflora
Cagra.0596s0062 1.0kb upstream 1.0kb upstream 1000 false Scaffold596: 266736-267735 Capsella grandiflora
Cagra.0596s0062 1.0kb downstream 1.0kb downstream 2324 true Scaffold596: 267736-270059 Capsella grandiflora
Cagra.0596s0062 1.0kb downstream 1.0kb downstream 1000 false Scaffold596: 269060-270059 Capsella grandiflora
Cagra.0596s0062 2.0kb upstream 2.0kb upstream 3324 true Scaffold596: 265736-269059 Capsella grandiflora
Cagra.0596s0062 2.0kb upstream 2.0kb upstream 2000 false Scaffold596: 265736-267735 Capsella grandiflora
Cagra.0596s0062 2.0kb downstream 2.0kb downstream 3324 true Scaffold596: 267736-271059 Capsella grandiflora
Cagra.0596s0062 2.0kb downstream 2.0kb downstream 2000 false Scaffold596: 269060-271059 Capsella grandiflora
Cagra.0596s0062 5.0kb upstream 5.0kb upstream 6324 true Scaffold596: 262736-269059 Capsella grandiflora
Cagra.0596s0062 5.0kb upstream 5.0kb upstream 5000 false Scaffold596: 262736-267735 Capsella grandiflora
Cagra.0596s0062 5.0kb downstream 5.0kb downstream 4111 true Scaffold596: 267736-271846 Capsella grandiflora
Cagra.0596s0062 5.0kb downstream 5.0kb downstream 2787 false Scaffold596: 269060-271846 Capsella grandiflora
Cagra.0596s0062 10.0kb upstream 10.0kb upstream 11324 true Scaffold596: 257736-269059 Capsella grandiflora
Cagra.0596s0062 10.0kb upstream 10.0kb upstream 10000 false Scaffold596: 257736-267735 Capsella grandiflora
Cagra.0596s0062 10.0kb downstream 10.0kb downstream 4111 true Scaffold596: 267736-271846 Capsella grandiflora
Cagra.0596s0062 10.0kb downstream 10.0kb downstream 2787 false Scaffold596: 269060-271846 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374832 5261 Brassicaceae View MSA
123834159 5264 Brassicales-Malvales View MSA
124344901 5266 SBM View MSA
124243124 5268 Malvidae View MSA
124062348 5270 Rosid View MSA
123737999 5271 Pentapetalae View MSA
122786601 5272 Eudicot View MSA
122048009 5273 Angiosperm View MSA
121348495 5274 Embryophyte View MSA
123426050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain