Gene : Cagra.0605s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24078:SF242 - CHAPERONE PROTEIN DNAJ 16-RELATED Genomic Order:  17
Name:  ? Cagra.0605s0017 Secondary Identifier:  ? PAC:28917866
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0605s0017 0.5kb upstream 0.5kb upstream 3529 true Scaffold605: 54037-57565 Capsella grandiflora
Cagra.0605s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold605: 54037-54536 Capsella grandiflora
Cagra.0605s0017 0.5kb downstream 0.5kb downstream 3529 true Scaffold605: 54537-58065 Capsella grandiflora
Cagra.0605s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold605: 57566-58065 Capsella grandiflora
Cagra.0605s0017 1.0kb upstream 1.0kb upstream 4029 true Scaffold605: 53537-57565 Capsella grandiflora
Cagra.0605s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold605: 53537-54536 Capsella grandiflora
Cagra.0605s0017 1.0kb downstream 1.0kb downstream 4029 true Scaffold605: 54537-58565 Capsella grandiflora
Cagra.0605s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold605: 57566-58565 Capsella grandiflora
Cagra.0605s0017 2.0kb upstream 2.0kb upstream 5029 true Scaffold605: 52537-57565 Capsella grandiflora
Cagra.0605s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold605: 52537-54536 Capsella grandiflora
Cagra.0605s0017 2.0kb downstream 2.0kb downstream 5029 true Scaffold605: 54537-59565 Capsella grandiflora
Cagra.0605s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold605: 57566-59565 Capsella grandiflora
Cagra.0605s0017 5.0kb upstream 5.0kb upstream 8029 true Scaffold605: 49537-57565 Capsella grandiflora
Cagra.0605s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold605: 49537-54536 Capsella grandiflora
Cagra.0605s0017 5.0kb downstream 5.0kb downstream 8029 true Scaffold605: 54537-62565 Capsella grandiflora
Cagra.0605s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold605: 57566-62565 Capsella grandiflora
Cagra.0605s0017 10.0kb upstream 10.0kb upstream 13029 true Scaffold605: 44537-57565 Capsella grandiflora
Cagra.0605s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold605: 44537-54536 Capsella grandiflora
Cagra.0605s0017 10.0kb downstream 10.0kb downstream 13029 true Scaffold605: 54537-67565 Capsella grandiflora
Cagra.0605s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold605: 57566-67565 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370592 5261 Brassicaceae View MSA
123835252 5264 Brassicales-Malvales View MSA
124342478 5266 SBM View MSA
124254324 5268 Malvidae View MSA
124068980 5270 Rosid View MSA
123743896 5271 Pentapetalae View MSA
122793145 5272 Eudicot View MSA
122043870 5273 Angiosperm View MSA
121344033 5274 Embryophyte View MSA
123428818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain