Gene : Cagra.0578s0070 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11945:SF175 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 Genomic Order:  70
Name:  ? Cagra.0578s0070 Secondary Identifier:  ? PAC:28898734
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0578s0070 0.5kb upstream 0.5kb upstream 2749 true Scaffold578: 252289-255037 Capsella grandiflora
Cagra.0578s0070 0.5kb upstream 0.5kb upstream 500 false Scaffold578: 252289-252788 Capsella grandiflora
Cagra.0578s0070 0.5kb downstream 0.5kb downstream 2749 true Scaffold578: 252789-255537 Capsella grandiflora
Cagra.0578s0070 0.5kb downstream 0.5kb downstream 500 false Scaffold578: 255038-255537 Capsella grandiflora
Cagra.0578s0070 1.0kb upstream 1.0kb upstream 3249 true Scaffold578: 251789-255037 Capsella grandiflora
Cagra.0578s0070 1.0kb upstream 1.0kb upstream 1000 false Scaffold578: 251789-252788 Capsella grandiflora
Cagra.0578s0070 1.0kb downstream 1.0kb downstream 3249 true Scaffold578: 252789-256037 Capsella grandiflora
Cagra.0578s0070 1.0kb downstream 1.0kb downstream 1000 false Scaffold578: 255038-256037 Capsella grandiflora
Cagra.0578s0070 2.0kb upstream 2.0kb upstream 4249 true Scaffold578: 250789-255037 Capsella grandiflora
Cagra.0578s0070 2.0kb upstream 2.0kb upstream 2000 false Scaffold578: 250789-252788 Capsella grandiflora
Cagra.0578s0070 2.0kb downstream 2.0kb downstream 4249 true Scaffold578: 252789-257037 Capsella grandiflora
Cagra.0578s0070 2.0kb downstream 2.0kb downstream 2000 false Scaffold578: 255038-257037 Capsella grandiflora
Cagra.0578s0070 5.0kb upstream 5.0kb upstream 7249 true Scaffold578: 247789-255037 Capsella grandiflora
Cagra.0578s0070 5.0kb upstream 5.0kb upstream 5000 false Scaffold578: 247789-252788 Capsella grandiflora
Cagra.0578s0070 5.0kb downstream 5.0kb downstream 7249 true Scaffold578: 252789-260037 Capsella grandiflora
Cagra.0578s0070 5.0kb downstream 5.0kb downstream 5000 false Scaffold578: 255038-260037 Capsella grandiflora
Cagra.0578s0070 10.0kb upstream 10.0kb upstream 12249 true Scaffold578: 242789-255037 Capsella grandiflora
Cagra.0578s0070 10.0kb upstream 10.0kb upstream 10000 false Scaffold578: 242789-252788 Capsella grandiflora
Cagra.0578s0070 10.0kb downstream 10.0kb downstream 12249 true Scaffold578: 252789-265037 Capsella grandiflora
Cagra.0578s0070 10.0kb downstream 10.0kb downstream 10000 false Scaffold578: 255038-265037 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367893 5261 Brassicaceae View MSA
123829772 5264 Brassicales-Malvales View MSA
124342991 5266 SBM View MSA
124253386 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain