Gene : Cagra.0578s0068 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11225 - NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN Genomic Order:  68
Name:  ? Cagra.0578s0068 Secondary Identifier:  ? PAC:28898754
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0578s0068 0.5kb upstream 0.5kb upstream 5641 true Scaffold578: 239984-245624 Capsella grandiflora
Cagra.0578s0068 0.5kb upstream 0.5kb upstream 500 false Scaffold578: 245125-245624 Capsella grandiflora
Cagra.0578s0068 0.5kb downstream 0.5kb downstream 5641 true Scaffold578: 239484-245124 Capsella grandiflora
Cagra.0578s0068 0.5kb downstream 0.5kb downstream 500 false Scaffold578: 239484-239983 Capsella grandiflora
Cagra.0578s0068 1.0kb upstream 1.0kb upstream 6141 true Scaffold578: 239984-246124 Capsella grandiflora
Cagra.0578s0068 1.0kb upstream 1.0kb upstream 1000 false Scaffold578: 245125-246124 Capsella grandiflora
Cagra.0578s0068 1.0kb downstream 1.0kb downstream 6141 true Scaffold578: 238984-245124 Capsella grandiflora
Cagra.0578s0068 1.0kb downstream 1.0kb downstream 1000 false Scaffold578: 238984-239983 Capsella grandiflora
Cagra.0578s0068 2.0kb upstream 2.0kb upstream 7141 true Scaffold578: 239984-247124 Capsella grandiflora
Cagra.0578s0068 2.0kb upstream 2.0kb upstream 2000 false Scaffold578: 245125-247124 Capsella grandiflora
Cagra.0578s0068 2.0kb downstream 2.0kb downstream 7141 true Scaffold578: 237984-245124 Capsella grandiflora
Cagra.0578s0068 2.0kb downstream 2.0kb downstream 2000 false Scaffold578: 237984-239983 Capsella grandiflora
Cagra.0578s0068 5.0kb upstream 5.0kb upstream 10141 true Scaffold578: 239984-250124 Capsella grandiflora
Cagra.0578s0068 5.0kb upstream 5.0kb upstream 5000 false Scaffold578: 245125-250124 Capsella grandiflora
Cagra.0578s0068 5.0kb downstream 5.0kb downstream 10141 true Scaffold578: 234984-245124 Capsella grandiflora
Cagra.0578s0068 5.0kb downstream 5.0kb downstream 5000 false Scaffold578: 234984-239983 Capsella grandiflora
Cagra.0578s0068 10.0kb upstream 10.0kb upstream 15141 true Scaffold578: 239984-255124 Capsella grandiflora
Cagra.0578s0068 10.0kb upstream 10.0kb upstream 10000 false Scaffold578: 245125-255124 Capsella grandiflora
Cagra.0578s0068 10.0kb downstream 10.0kb downstream 15141 true Scaffold578: 229984-245124 Capsella grandiflora
Cagra.0578s0068 10.0kb downstream 10.0kb downstream 10000 false Scaffold578: 229984-239983 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373626 5261 Brassicaceae View MSA
123800589 5264 Brassicales-Malvales View MSA
124297989 5266 SBM View MSA
124149742 5268 Malvidae View MSA
124073595 5270 Rosid View MSA
123740371 5271 Pentapetalae View MSA
122788822 5272 Eudicot View MSA
122043795 5273 Angiosperm View MSA
121346539 5274 Embryophyte View MSA
123424897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain