Gene : Cagra.0594s0009 C. grandiflora v1.1
Defline:  (1 of 3) PTHR32100:SF17 - OMEGA-3 FATTY ACID DESATURASE, ENDOPLASMIC RETICULUM Genomic Order:  9
Name:  ? Cagra.0594s0009 Secondary Identifier:  ? PAC:28901653
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0594s0009 0.5kb upstream 0.5kb upstream 3968 true Scaffold594: 36487-40454 Capsella grandiflora
Cagra.0594s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold594: 39955-40454 Capsella grandiflora
Cagra.0594s0009 0.5kb downstream 0.5kb downstream 3968 true Scaffold594: 35987-39954 Capsella grandiflora
Cagra.0594s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold594: 35987-36486 Capsella grandiflora
Cagra.0594s0009 1.0kb upstream 1.0kb upstream 4468 true Scaffold594: 36487-40954 Capsella grandiflora
Cagra.0594s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold594: 39955-40954 Capsella grandiflora
Cagra.0594s0009 1.0kb downstream 1.0kb downstream 4468 true Scaffold594: 35487-39954 Capsella grandiflora
Cagra.0594s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold594: 35487-36486 Capsella grandiflora
Cagra.0594s0009 2.0kb upstream 2.0kb upstream 5468 true Scaffold594: 36487-41954 Capsella grandiflora
Cagra.0594s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold594: 39955-41954 Capsella grandiflora
Cagra.0594s0009 2.0kb downstream 2.0kb downstream 5468 true Scaffold594: 34487-39954 Capsella grandiflora
Cagra.0594s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold594: 34487-36486 Capsella grandiflora
Cagra.0594s0009 5.0kb upstream 5.0kb upstream 8468 true Scaffold594: 36487-44954 Capsella grandiflora
Cagra.0594s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold594: 39955-44954 Capsella grandiflora
Cagra.0594s0009 5.0kb downstream 5.0kb downstream 8468 true Scaffold594: 31487-39954 Capsella grandiflora
Cagra.0594s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold594: 31487-36486 Capsella grandiflora
Cagra.0594s0009 10.0kb upstream 10.0kb upstream 13468 true Scaffold594: 36487-49954 Capsella grandiflora
Cagra.0594s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold594: 39955-49954 Capsella grandiflora
Cagra.0594s0009 10.0kb downstream 10.0kb downstream 13468 true Scaffold594: 26487-39954 Capsella grandiflora
Cagra.0594s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold594: 26487-36486 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375197 5261 Brassicaceae View MSA
123840085 5264 Brassicales-Malvales View MSA
124322677 5266 SBM View MSA
124240944 5268 Malvidae View MSA
124072004 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain